Gene Oant_0948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_0948 
Symbol 
ID5380789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009667 
Strand
Start bp984592 
End bp985797 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content56% 
IMG OID640833593 
Productdiguanylate cyclase 
Protein accessionYP_001369498 
Protein GI153008283 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGGAG CCGACTTTAT CCTCCTGATC AACATGACCG TTTCCGGTCT GTTTGCTTTC 
GCATTTCTCG GCATTGCCGT TTATGCGCGG GATAATGCGG CCGCGCCTGT CTTCGCCTTC
GGCTTTATTT TCGCAATGCT CTATTTCCTG ACAGAGCTTG CCATGCCTTC CATTCCCAAT
CCCCGCCTCG GCTATATGCT CGCCTTTTCG ACCTATTACC TGACATTGTC CTGTCTGGTC
GTCGGTCTGG CGCGGATGTA TGCCCGACCG GTGCCGTGGA TTGCGCTCGG TCTGCTGACC
ATTGCATCTC TCGCCGCGGT CTACAGCATA TATGACATTG CCCGCAGCCA GATGATCGGC
ATGCTGCTTT ATCAGGCGCC CTATTTCCTC GTACTCCTTC TGGCAGTGTG GCTGATCCTG
CGGGTGGAAC GCAACGGTAT CGATACCTTG ATGGCGATAC TGTTTGGTAT CAGTGCCGTC
CACTTCCTGT TCAAGCCGGT CATCGCCGTG CTGTCGGGAG GCGCGGGTGC TGAACCGGCT
GATTATATCG ATACGACCTA TGCAATGTTC TCGCAGTCAA TCGGTGCTGC TCTTTCCGTC
GCAGGCGGGC TGCTTCTGCT CTTGAGCCTG ATGCGGGAGC TGATCGCCAA TATGTTGATC
CGCTCGGAAA CGGACCAGCT ATCGACGTTG CTCAACCGGC GCGGCTTCGA GTTTCGTGCC
GAAGCCGCAA TTGAAAAGTC GAAACGTATG CGGCAGGCTC TGTCGCTTGT TCTGTGCGAC
ATCGATCACT TCAAGGCAAT CAACGATACA CATGGTCATG CGCTGGGAGA TCGCGTCATC
GCCGCTTTCT CTGCCGAATT GCGCAAGGCA GCCAATGCCA AGGGTGGGAT TGCCGCGCGT
ATTGGCGGCG AGGAATTCGC GATCATTCTG CCGGGCAATA CGATCCAGTC CGCATGGAGA
TTTGCGGACA AGACCCGGCT TGTCTGTCGC GATATCCATA TTCCGGGCAG GAACGGCGGG
ATTGAATTCA CCGTGAGCTT CGGTATCGCG GAAATGGAAT TCGACGATGT GTTTTCCGAT
CTCTACAAGC GGGCCGACGG GGCGCTTTAT GAAGCGAAGA AGGGCGGGCG CAACTGCGTC
CGCAGCGCTC TGCCGATATT GGTGGACGAA AACGTTGTGG AGTTCCGCTC AAAGGCCGGG
CGTTGA
 
Protein sequence
MNGADFILLI NMTVSGLFAF AFLGIAVYAR DNAAAPVFAF GFIFAMLYFL TELAMPSIPN 
PRLGYMLAFS TYYLTLSCLV VGLARMYARP VPWIALGLLT IASLAAVYSI YDIARSQMIG
MLLYQAPYFL VLLLAVWLIL RVERNGIDTL MAILFGISAV HFLFKPVIAV LSGGAGAEPA
DYIDTTYAMF SQSIGAALSV AGGLLLLLSL MRELIANMLI RSETDQLSTL LNRRGFEFRA
EAAIEKSKRM RQALSLVLCD IDHFKAINDT HGHALGDRVI AAFSAELRKA ANAKGGIAAR
IGGEEFAIIL PGNTIQSAWR FADKTRLVCR DIHIPGRNGG IEFTVSFGIA EMEFDDVFSD
LYKRADGALY EAKKGGRNCV RSALPILVDE NVVEFRSKAG R