| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_0927 |
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| Symbol | dapF |
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| ID | 5378631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ochrobactrum anthropi ATCC 49188 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009667 |
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| Strand | - |
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| Start bp | 962825 |
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| End bp | 963727 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640833572 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001369477 |
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| Protein GI | 153008262 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACCA AGGCAGCCTT CGCCAAGATG AACGGGCTCG GCAATCAGAT CATCGTTGCC
GACATGCGCG GTCGCGCGGA CCGGATAACG CCTGAAGCCG CGATCCGTCT TGCAGGCGAC
AGCGAAACCG CCTTCGATCA GATCATGGCG ATCCACGATC CGCGCACGGC GGGAACCGAC
AACTATATTG CGATCATCAA TTGCGACGGC ACGGAAGCGC AGGCTTGCGG CAACGGCACA
CGCTGCGTCG TTCAGGCGCT GGCCGCCGAG ACCGGTCGGC AGGCCTTCAC TTTTGAGACC
CGCGCCGGAA TACTGACGGC GACCGAACAC GAAGACGGAC TGATTTCAGT CGATATGGGC
AAGCCGCGCT TCGATTGGCA GGACATTCCG CTTGCCGAGG AATTTCGCGA TACGCGCATG
ATCGAACTGC AGGTCGGCCC CATCGACGCG CCGGTTCTGC ATTCGCCGTC GGTTGCATCC
ATGGGCAACC CGCACGCAAT CTTCTGGGTC GACCGTGATG TCTGGTCCTA TGAGCTGGAA
AAATTCGGAC CTCTTCTGGA ACATCATCCG ATCTTTCCGG AGCGCGCCAA TATCTCCATA
GCCCATGTCA CCTCGCCCGA GACAATTGAT CTGCGCACGT GGGAGCGCGG TGCAGGTCTG
ACCCGCGCCT GTGGTTCCGC CGCCTGCGCC GCCGCCGTAT CGGCAGTGCG CACGCGCCGC
ACCGGGCGCA CAGTCACCGT CAATGTTCCC GGTGGCCCGC TCAGGATCGA ATGGCGCGAC
GACGATCATG TCATGATGAC CGGCCCCGCC GAATGGGAAT TTTCAGGCAC TTTCGATCCT
GCAACCGGCG AATGGAGCCG CGACGCCCAG AATGACAAGC CAACTGACAG GGGTGCAGCC
TGA
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| Protein sequence | MATKAAFAKM NGLGNQIIVA DMRGRADRIT PEAAIRLAGD SETAFDQIMA IHDPRTAGTD
NYIAIINCDG TEAQACGNGT RCVVQALAAE TGRQAFTFET RAGILTATEH EDGLISVDMG
KPRFDWQDIP LAEEFRDTRM IELQVGPIDA PVLHSPSVAS MGNPHAIFWV DRDVWSYELE
KFGPLLEHHP IFPERANISI AHVTSPETID LRTWERGAGL TRACGSAACA AAVSAVRTRR
TGRTVTVNVP GGPLRIEWRD DDHVMMTGPA EWEFSGTFDP ATGEWSRDAQ NDKPTDRGAA
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