Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_0812 |
Symbol | trpA |
ID | 5379417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009667 |
Strand | + |
Start bp | 840354 |
End bp | 841193 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640833457 |
Product | tryptophan synthase subunit alpha |
Protein accession | YP_001369363 |
Protein GI | 153008148 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTACTC GCATCGACAC CAAATTCGCT GAACTGAAGG CCGAGGGCCG TCCGGCGCTC GTTACCTATT TCATGGGTGG CGATCCCGAT CTGGAAACCT CGCTCAAGGT GATGAAGGCC TTGCCAAAGG CTGGTGCCGA CGTGATCGAA CTCGGTATGC CCTTCTCCGA TCCGATGGCA GACGGACCCG CCATTCAGGC CGCTGGCCTG CGCGCCCTCA ACGCCGGTCA GACGCTTGCC AAGACGTTGC ACATGGCAGC AGAATTCCGC AAGGAAGACA ACACGACCCC GATCGTCATG ATGGGCTATT ACAACCCGAT CTATATTTAC GGCGTGGAAC GCTTTCTGGC CGATGCCAAG GCTTCCGGCG TGGACGGGCT GATCGTCGTC GATCTTCCGT CTGAAATGGA TGCTGAGCTT TGCATTCCGG CCATGAAGGC GGGTATCAAT TTTATCCGCC TCACCACGCC AACCACGGAC GACAAGCGCT TGCCGAAGGT GCTGCATAAT TCATCGGGCT TCGTCTATTA CGTCTCGATG AACGGCATCA CCGGTTCGGC CATTGCCGAT ACGGCAAAGG TCGGTGAAGC TGTGCGTCAC ATCAAGAAGA GCACCGATCT GCCGATCTGT GTCGGTTTCG GCGTCAAGAC ACCGGAGCAG GCAGCAGCCA TCGCCACCCA TGCCGATGGC GTCGTCGTCG GCACGGCGAT TGTCAACGCG ATTGCCGGTG AACTGGACGA AAACGGCAAG GCGAAGGGCG ATCCTGTCGC CGCTGCAACC AGACTTGTCC ACGCCCTTGC GGAGAGTGTG CGTGCCACAC GCCTTGAAGC CGCCCAATAA
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Protein sequence | MTTRIDTKFA ELKAEGRPAL VTYFMGGDPD LETSLKVMKA LPKAGADVIE LGMPFSDPMA DGPAIQAAGL RALNAGQTLA KTLHMAAEFR KEDNTTPIVM MGYYNPIYIY GVERFLADAK ASGVDGLIVV DLPSEMDAEL CIPAMKAGIN FIRLTTPTTD DKRLPKVLHN SSGFVYYVSM NGITGSAIAD TAKVGEAVRH IKKSTDLPIC VGFGVKTPEQ AAAIATHADG VVVGTAIVNA IAGELDENGK AKGDPVAAAT RLVHALAESV RATRLEAAQ
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