| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_0727 |
|---|
| Symbol | |
|---|
| ID | 5379586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | + |
|---|
| Start bp | 754650 |
|---|
| End bp | 755663 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640833372 |
|---|
| Product | type II secretion system protein |
|---|
| Protein accession | YP_001369278 |
|---|
| Protein GI | 153008063 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4965] Flp pilus assembly protein TadB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.352668 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGGC CCGGTGCCAG CATTGTGATG TTCATCGTGC TCGCCGTTGT CGCCTGCGCG
GCTTTGTTCT ATGCGCTCTT TTATGAAAAG CTCGGCAAGA AGGACCACGC GGCACGGCGC
TTTGAAACCG TGCGCAACAG CGGTTCAGAA CGGGCGATAA CGCGTAGCGA ACGCGACAGA
AACGCCGACA TCCAAAAGCG CCGCAAGCAG TTGCAGGATA ATATCAAGGA TCTGGAAGCG
CGGCAGAAGC AGCGCGAGAA GAACCAGAAA TATCCACCCC TGCGCATTCT TCTGGCACAG
GCGGGGCTGA GCCTCACGTT GCAGAAATTC TACATCTATT CCGGCGTGGC AGCGTTTCTC
GCAACATTCA TTGCACTGAT TTTCGGCGCG CCGCTGCTTT TCCTGCCAGG TATCGCAATT
GCCGGTTTTT TCGGTTTGCC GCGCTGGTTC GTGCTGCAGA AGCGCAAACG TCGGCTGAAG
AAATTCCTTG AAGAATTTCC CAACGCGCTT GATGTCATTG TGCGCGCAAC CCGGGCGGGA
CTGCCGCTTA ATGACGGTCT GAGACTTATT GCGAGTGAGG CAGTTGAACC GGTCAAGAGC
GAGTTCAAGA AGGTGGTCGA GGCACAGCAG ATCGGCCTTT CTATCCCTGA AGCGGTCGGC
AAGATGCCCG ATTCCATGCC CTGCCCGGAA ACCAACTTCT TCGCCATCGT CATCCAGATA
CAGGCGCAGG CAGGCGGTAA TCTTTCCGAA GCGCTCAATA ATCTTTCAAA GGTTCTGCGC
GACCGGAAGA AGATGAAGGC CAAGGTCGAT GCGCTTTCCA TGGAAGCCAA GGCTTCGGCT
GCGATCATCG GCGCGCTGCC TTTCATCGTT ATGGTTCTCG TCTATCTGAC GAGCCCGCAA
TATATGACGC TGCTTTTCAC GTCATCCACC GGCCATATGC TCCTGGGCAT TGCAGCCGTT
TTGATGCTGA CCGGCATCTT CATCATGAAA AATATGATCA ATTTCGATAT GTGA
|
|---|
| Protein sequence | MTGPGASIVM FIVLAVVACA ALFYALFYEK LGKKDHAARR FETVRNSGSE RAITRSERDR
NADIQKRRKQ LQDNIKDLEA RQKQREKNQK YPPLRILLAQ AGLSLTLQKF YIYSGVAAFL
ATFIALIFGA PLLFLPGIAI AGFFGLPRWF VLQKRKRRLK KFLEEFPNAL DVIVRATRAG
LPLNDGLRLI ASEAVEPVKS EFKKVVEAQQ IGLSIPEAVG KMPDSMPCPE TNFFAIVIQI
QAQAGGNLSE ALNNLSKVLR DRKKMKAKVD ALSMEAKASA AIIGALPFIV MVLVYLTSPQ
YMTLLFTSST GHMLLGIAAV LMLTGIFIMK NMINFDM
|
|---|
| |