Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_0726 |
Symbol | |
ID | 5378554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009667 |
Strand | + |
Start bp | 753175 |
End bp | 754653 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640833371 |
Product | type II secretion system protein E |
Protein accession | YP_001369277 |
Protein GI | 153008062 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.50497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTCGGCA GAAGAGGCAA CGATACGGGA AACAAGCCGG AAAGCGGAAC GCGACCGGCT ATGCCGAAAC CTGCCAGTTC CGCTGCGATG CCTGCTCCGA CCCAGCCCGT CGTGCAACCG TCCCGCATGC AGGCAGCAGT ACCAAGCACT CCGGCGAAAT CCCATACCCA GACGGGTACG CAAGGGCGCG AGAAGACCGA AAGCTATTAC GACACCAAAT CGCAGGTCTT CTCGGCACTC ATCGACACAA TCGACCTGTC GCAGCTTTCC CGCATGGCGC CGGATGCCGC GCGTGAGGAA ATCCGCGACA TCGTCAACGA CATCATCGCC ATCAAGAACT TCGTCATGTC GATTGCCGAG CAGGAAGAAC TGCTCGATGA TATCTGCAAC GATGTTCTGG GCTACGGCCC GCTGGAGCCG CTTCTTTCTC GCGACGACAT CGCCGATATC ATGGTCAACG GTTCGCGCCG CACCTATATC GAAGTGGACG GTCTGCTGCA GGAAACCGGC ATTCGTTTCC GCGATAACCA GCAGCTTCTG AACATCTGCC AGCGTATCGT GAGCCAGGTC GGACGCCGGG TCGACGAATC GAGCCCGATC TGCGATGCGC GCCTGCCCGA CGGCTCGCGC GTCAACGTCA TCGCGCCACC ACTGTCGCTC GACGGCCCCA CCCTGACCAT CCGCAAGTTC CGCAAGGACA AGCTGACACT CGACCAGCTG GTGCGATTCG GCGCCATATC GAATGCCGGG GCGGAACTGC TGCAGATCAT CAGCCGGGTG CGCTGCAATG TCATTATTTC CGGCGGCACC GGTTCGGGCA AAACCACGCT TCTGAACTGC CTGACACGCT ATATCGACAC GCATGAACGC ATCATCACCT GCGAAGATTC GGCTGAACTG CAATTGCAGC AGCCGCACGT GGTGCGTCTG GAAACCCGCC CGCCCAATCT GGAAGGCGAA GGCGAAGTCA CCATGCGCGA TCTGGTTAAG AACTGTCTGC GTATGCGTCC CGAACGCATT ATTGTCGGTG AAGTGCGCGG ATCCGAAGTG TTCGATCTTT TGCAGGCCAT GAACACCGGC CACGACGGTT CGATGGGCAC GATCCATGCC AACAGTCCGC GTGAATGCCT CAACCGTATG GAAGCCATGA TCGCCATGGG CGGCTATGTG CTGCCACAAA AGACCGTGCG CGAGATCATC GTCGGTTCTG TCGATATCAT CATCCAGGCC GCACGTCTGC GCGACGGCAC ACGCCGCATT ACCCACATCA CCGAAGTGGT GGGGCTGGAA GGCGACGTCA TCACCACTCA GGATCTCGTT CTCTACGATA TCAAGGGAGA AGATGCCTCT GGCCGTATTC TTGGCAACCA TAGTTCGACC GGCATCGGGC GACCTGCCTT CTGGGAACGC GCCCGCTATT ATAATGAGGA TAACCGCCTT GCTTCTGTGC TCGACAGCAT GGAAAGGGCA AACACATGA
|
Protein sequence | MFGRRGNDTG NKPESGTRPA MPKPASSAAM PAPTQPVVQP SRMQAAVPST PAKSHTQTGT QGREKTESYY DTKSQVFSAL IDTIDLSQLS RMAPDAAREE IRDIVNDIIA IKNFVMSIAE QEELLDDICN DVLGYGPLEP LLSRDDIADI MVNGSRRTYI EVDGLLQETG IRFRDNQQLL NICQRIVSQV GRRVDESSPI CDARLPDGSR VNVIAPPLSL DGPTLTIRKF RKDKLTLDQL VRFGAISNAG AELLQIISRV RCNVIISGGT GSGKTTLLNC LTRYIDTHER IITCEDSAEL QLQQPHVVRL ETRPPNLEGE GEVTMRDLVK NCLRMRPERI IVGEVRGSEV FDLLQAMNTG HDGSMGTIHA NSPRECLNRM EAMIAMGGYV LPQKTVREII VGSVDIIIQA ARLRDGTRRI THITEVVGLE GDVITTQDLV LYDIKGEDAS GRILGNHSST GIGRPAFWER ARYYNEDNRL ASVLDSMERA NT
|
| |