Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_0722 |
Symbol | |
ID | 5380233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009667 |
Strand | + |
Start bp | 748798 |
End bp | 749613 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640833367 |
Product | SAF domain-containing protein |
Protein accession | YP_001369273 |
Protein GI | 153008058 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.268977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATCAG CTCGACTGCT CATTTTAGGA GTGGCCGTTC TTGCGGCAGG TGGCGCTGGC TATATTGCCA TGAACCTCGC CGCACCGCCG CCTGCTCCCG TTGTCGTCGC GCCTGAAACG CCGCAGATGA AGCTGGAAGA CGTGCTGGTT GCCACCGAAA ATCTCGGTGT CGGCGCAGAG CTTACATCGC AGATGCGCTG GCAGCCCTGG CCTGCCGAAG CTGTCAGCGA CGGCTATATC ACCCGCGCAA GCGAACCCGA CGCCATCAAT CAGTTGAGTG GCGCAACCGT GCGCCTGCAG TTCTTCACGG GCGAACCGAT CCGCAAGACC AAGCTCATCG GTCCGGGACA GAGCTTCATG TCGTCGATCC TGCCGCCCGG CATGCGCGCC GTCGCGACAC AGATCAATGC CGAAAGCTCG GCAGGCGGCT TCATTCTTCC CAATGATTTC GTCGATGTCA TCATGACCCG CCGCAAGCCG GACAATGGCG ATAAATCGCT GACACCATTC ACCACGGAAA CCGTGTTGCA GAATGTGCGT GTTCTGGCCA TCGATCAGGC CATTCAGGAA GACGAGCAGG GCCGCAAGGT CATGGTCGGC CAGACCGCGA CGCTCGAAGT CACGCCGGAA CAGGCCGAAA TCATCACCGT CGCCCAGCAG ATGGCGGACC GCCTGACGCT GGCACTTCGC TCGACACAGG ATGTCGAGGA CAAGGATATC AAGCAGGCCG ACTATCTGGT TTCCTCGCCG ACCCGCAGCG GAACGGTCAA GGTCATCAAG TCCGGCAGCG TTACAGAAAT AGGACCGCGC TCATGA
|
Protein sequence | MKSARLLILG VAVLAAGGAG YIAMNLAAPP PAPVVVAPET PQMKLEDVLV ATENLGVGAE LTSQMRWQPW PAEAVSDGYI TRASEPDAIN QLSGATVRLQ FFTGEPIRKT KLIGPGQSFM SSILPPGMRA VATQINAESS AGGFILPNDF VDVIMTRRKP DNGDKSLTPF TTETVLQNVR VLAIDQAIQE DEQGRKVMVG QTATLEVTPE QAEIITVAQQ MADRLTLALR STQDVEDKDI KQADYLVSSP TRSGTVKVIK SGSVTEIGPR S
|
| |