Gene Oant_0682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_0682 
Symbol 
ID5380521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009667 
Strand+ 
Start bp708148 
End bp708819 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content53% 
IMG OID640833329 
ProductVirB8 family protein 
Protein accessionYP_001369236 
Protein GI153008021 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3736] Type IV secretory pathway, component VirB8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.765146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCACGA CAGATAATCT CAAAAGCTAT TTCGAGAAAG CGCGTCGCTT TGATCAAGAC 
CGCATGATTC AGGTCGAGCG ATCAAATCGC GTGGCGTGGT CGATCGCAAT TGCTGCCGGT 
ATTGTTGCCG GCATATCAAT CCTCGCCGTT GCGAGCTTAG CGCCGCTGAA AACTGTCGAA 
CCTTTCGTGG TTCGTGTCGA CAATTCTACC GGGATCGTGG ATGTCGTTTC AGCGCTGTCG 
GCGACCGCTG GCACTTACGA CGAAGCCGTG ACCAAATATT TTGCGGCAAA ATATGTTCGT 
GGACGCGAAG GCTATGTCTG GAGCGAAGCC CAGGAGAATT TTCGAACAAT TGCGCTTCTC 
TCTACGCAAG CCGAACAGGC GCGGTTCGCA GCTACTTATC GTGGCAGCAA TCCGCAATCA 
CCACAAAATG TCTATGGCCG TTCTGCCACG GTGCGGATTA ACATCGTCTC CATCGCGCTC 
ATCAATCAAA ACGTGGTGTC GGTACGCTAC ATGCGTAGCG TAACCCGCGG TGAAGAAGTC 
CGGACAACAC ATTTTGTTGC GACCCTCACC TATTCCTACG CCAACGCTCC CATGTCATCG 
ACAGACCGAC TGGTGAATCC GCTTGGTTTC GCTGTTAGCG AATATCGGGC AGATCCGGAG 
GCAATCGATT GA
 
Protein sequence
MVTTDNLKSY FEKARRFDQD RMIQVERSNR VAWSIAIAAG IVAGISILAV ASLAPLKTVE 
PFVVRVDNST GIVDVVSALS ATAGTYDEAV TKYFAAKYVR GREGYVWSEA QENFRTIALL 
STQAEQARFA ATYRGSNPQS PQNVYGRSAT VRINIVSIAL INQNVVSVRY MRSVTRGEEV 
RTTHFVATLT YSYANAPMSS TDRLVNPLGF AVSEYRADPE AID