| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_0604 |
|---|
| Symbol | |
|---|
| ID | 5380802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | - |
|---|
| Start bp | 633455 |
|---|
| End bp | 635248 |
|---|
| Gene Length | 1794 bp |
|---|
| Protein Length | 597 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640833257 |
|---|
| Product | chloride channel core |
|---|
| Protein accession | YP_001369164 |
|---|
| Protein GI | 153007949 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0038] Chloride channel protein EriC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAATA TCGCTGAACT GCGGCATAAC CGGTATTTGC GGGTTCTCTT TGTACCCTTT
CGCATGCGTG CACTGGTTCG CGGCAGCGAA ATAGGCCTCG TTATCGCCGG CACTGTCATC
GGCATCATTT CAGGGCTGAT GGTTGCCGCG ATTGGCAGCA TTTCCCAATG GATGCATCAG
GCAATCTTCG CTCTTGAACC CGGCGAAAAA CTGAGCTCGG CGGCATCATT GCAACCCAGC
GCTTATATCG CGCCGCTCGC GGGCGGCATC TTGATGGGGA TCGTGATCTG GGTTCTCGCG
CGCTGGCGCA AGCGGCCCAT CGTCGACCCT ATCGAAGCAA ATGCACTTCA TGGCGGACGC
CTGTCGCTGA CGGACAGCTT CATCCTCGTC GGACAGAACC TGATTTCGAA CGGTTTCGGC
GCATCGGTCG GGCTTGAAGC CGCTTATACG CAGCTTGCGA GCGGTTTCGC ATCCCGTATC
GGTCGGGCAC TCAAGCTTCG TCGTGCAGAT TTGCGAACAC TGGTCGGCTG CGGCGCTGCG
GCAGCTATTG CCAGCGCCTT CAATGCTCCG CTGACTGGGG CATTCTATGC ATTCGAACTC
ATCATCGGCG TCTATTCGAT TGCCACGCTG GCGCCTGTCG TCGTGGCGGC GATCGTCGGT
GCGCTGGTGA CGCAGGCAAT TGGCGGAGCG CCCTTTGTCA TCGATATCGG TCAGATCAAC
GACATCACCC CGCGCGACTA CGTGCCAGCG CTCGTTCTCG GCTTCTTTTC GGCAGGTATT
GCCATCCTCA TCATGCGCGG GGTTACCTTT GTTGAGAAGG TCGCTCGACG CAGCGTGGTG
CCGAATGTTA TGGCGCCAGC AATCGGTGGG GCCGTCGTCG GCATGATCGC TTTCATTTCG
CCTCAGGTTC TGGCCTCAGG ACATGGGGCG CTGCATCTCG ATCTCAATGC AAATATCACT
ATTCCGGCGC TCCTGCTCCT GATCCTCAGC AAGTCGCTTG CCTCTGCCGT CTCCATTGGC
GCAGGTTTTC GCGGCGGTCT GTTCTTCGCA TCGCTATTTC TCGGCGCGCT GACGGGCAAG
CTGTTTGCCG CCGTGGCCGG AGCGGTGCTG CCTGCCGGCC TGGCACTTGC ACCTGAGGTC
TATGCCGTTA TCGGCATGAG CTCTCTTGCC GTGGCGGTTG TCGGCGGCCC GATGACCATG
ACCTTTCTTG CGCTGGAAAT GACCGGTGAC TTTCCTATCG CGATGCTCGT TCTTGGAGCC
GTCGTCTCGT CCTCGCTGAT GGTGCGGAAG ACCTTCGGTT ACTCCTTCGC AACGTGGCGC
TTTCACCTGC GCGGCGAGGC TATCCGGTCC GCGCACGACA TTGGCTGGAT ACGCAATCTG
ACCGTAAACC GGATGATGCG TCACGATGTG CGAACCGTGC TGATCGATAC CGATATAGAA
ACCTTCCGGC ACGATTTCCC TCTTGGCTCG ACCCAGCGCG TCATCGCGGT CGATGCCGAT
GGACGCTATG TCGGCATGAT CCCGGTTCCA GAGGTCTATG CCGACAGCTT CGACACATCC
GACGGCGAAC ACAGCATCAG CGAGCTTCTC AAATATCAGG ACGAGTTCCT GCTGCCCCAG
ATGAACGCCA AGGAAGCCGT CGCCCGTTTC GACCGGGCAG AAAGCGAAGC TCTGGCCGTG
GTAAACAACG CACAGGAGCG TAAGGTGCTC GGTCTTCTCA GTGAAGCGCA CACCCTGCGT
CGCTACAGCG AGGAGCTGGA CCGACGGCGG CGTGAAGTTT CCGGTGAGGT CTGA
|
|---|
| Protein sequence | MMNIAELRHN RYLRVLFVPF RMRALVRGSE IGLVIAGTVI GIISGLMVAA IGSISQWMHQ
AIFALEPGEK LSSAASLQPS AYIAPLAGGI LMGIVIWVLA RWRKRPIVDP IEANALHGGR
LSLTDSFILV GQNLISNGFG ASVGLEAAYT QLASGFASRI GRALKLRRAD LRTLVGCGAA
AAIASAFNAP LTGAFYAFEL IIGVYSIATL APVVVAAIVG ALVTQAIGGA PFVIDIGQIN
DITPRDYVPA LVLGFFSAGI AILIMRGVTF VEKVARRSVV PNVMAPAIGG AVVGMIAFIS
PQVLASGHGA LHLDLNANIT IPALLLLILS KSLASAVSIG AGFRGGLFFA SLFLGALTGK
LFAAVAGAVL PAGLALAPEV YAVIGMSSLA VAVVGGPMTM TFLALEMTGD FPIAMLVLGA
VVSSSLMVRK TFGYSFATWR FHLRGEAIRS AHDIGWIRNL TVNRMMRHDV RTVLIDTDIE
TFRHDFPLGS TQRVIAVDAD GRYVGMIPVP EVYADSFDTS DGEHSISELL KYQDEFLLPQ
MNAKEAVARF DRAESEALAV VNNAQERKVL GLLSEAHTLR RYSEELDRRR REVSGEV
|
|---|
| |