Gene Oant_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_0548 
Symbol 
ID5380248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009667 
Strand
Start bp576533 
End bp577294 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content59% 
IMG OID640833201 
Producthemolysin A 
Protein accessionYP_001369108 
Protein GI153007893 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGAG AAACGAGCGA CAAGAACCTG CGGCTCGATC AACTGCTGGT GGAGCTTGGA 
CTGTTTGCAA CGCGTTCGCG GGCGCGTGAT GCAATCCAGC GCGGCACGGT CAAGGTGGAC
GGCAAGCCCG TCACCAAGCC GGGCCAGACG GTTTTGCGCA CCGCAAAGAT CGCCGTGGAT
GATCCGGCGA GTGCTTATGT TTCTCGCGCT GCCTTGAAGC TTATCGCGGC GCTTGACCAT
TTCGAGCTTG ATGTGAAGGG GCGCACCGCG CTCGACATAG GCGCATCGAC AGGCGGTTTC
ACGCAAGTTT TGCTGGAGCG CGGCGCAAGT CATGTTCTTG CCATCGATGT CGGCCACGAC
CAGTTGCACG AGACCCTGCG CGCCGATCCA CGCGTCACCA ACAAGGAAGG GCTCAATGCT
CGTGCGCTGG AACTTTCCCA TCTCGATGGA CGCGAAATCG ATTGCGTGGT TTCGGACGTG
AGTTTTATTT CGCTGAAACT CGCCTTGCCT CCGGCATTGG CCTTTGCGCA AAAAGGTGCT
ATCTGCGCGC TTCTCGTAAA GCCGCAATTT GAAGCGGGCC GCGAGGCTAT CGGCAAGGGC
GGCATTTTGC GCGATCCGAA AGATGGCGAA CGCATAGCAG AAGAACTGAA ATCATGGCTT
GAGACGCTGC CCGGCTGGCG CGCGCTCGGC CTCTGCCCGT CGCCCATCGA AGGCGGCGAT
GGCAATCGTG AATATCTCCT GGCAGGAAAG AAGGACCAAT GA
 
Protein sequence
MSGETSDKNL RLDQLLVELG LFATRSRARD AIQRGTVKVD GKPVTKPGQT VLRTAKIAVD 
DPASAYVSRA ALKLIAALDH FELDVKGRTA LDIGASTGGF TQVLLERGAS HVLAIDVGHD
QLHETLRADP RVTNKEGLNA RALELSHLDG REIDCVVSDV SFISLKLALP PALAFAQKGA
ICALLVKPQF EAGREAIGKG GILRDPKDGE RIAEELKSWL ETLPGWRALG LCPSPIEGGD
GNREYLLAGK KDQ