| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_0541 |
|---|
| Symbol | |
|---|
| ID | 5380954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | + |
|---|
| Start bp | 570655 |
|---|
| End bp | 571605 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640833194 |
|---|
| Product | histone deacetylase superfamily protein |
|---|
| Protein accession | YP_001369101 |
|---|
| Protein GI | 153007886 |
|---|
| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACAC GGCTTTACTG GCATCCGATC TATCTCGAAC ATCTGACCCC GCCCGGCCAT
CCCGAGCGCC CGGATCGTAT CCGTGCCTTG ATGAGCGAAT TGGAGGGGCC GGATTTCTAT
CGGCTCGACC GGGTGGAAGC GCCGCGCGGC GACGAGGCGT CAGTGTTGCT TGCCCATCCG
GAAAAGCATC TGGAAGCCAT ACGCGCCGAA ATACCGGAGC CTGCTTCGGA CGAGGCAGCG
CCAGCGCCCG TGGTGAAGCT TGACGGCGAC ACCTATGTCA GCCCGAAAAG TCTGGATGCA
GCGCTGACGG CGATTGGTGC GGCGACAGCG GCGGTCGATG ATGTCTTTTC CGGTGCTGCA
AACAACGTGT TCGTTGCAGC CCGCCCGCCG GGACATCATG CTGAGCGTTC CACTGCGATG
GGCTTTTGCC TTTTCAACAA TATTGCGATT GCCGCCCGTC ATGCACAGCA GCGTCATGGC
GCGGAACGTG TCGCTATCGT CGATTGGGAT GTCCATCACG GCAACGGAAC GCAGGATATT
TTCAGGGACG ATCCAAGCGT CCTGTTCTGT TCGACGCATC AGTTTCCCTT GTATCCCGGA
ACGGGGTCGA AGGACGAAAC CGGCGTCGGC AACATCTTCA ATGCACCGCT TTCCCCCGAT
ACGGGAAGCC GCGAATTCCG CGAGGCATTT AATAGTCGTG TATTGCCCGC TTTGGACAAT
TTCCGGCCAG ATTTGATCCT TATTTCGGCG GGCTTCGATG CTCATTTTCG CGATCCGCTG
GCCGAGCTCA ATCTTGACGA AGCGGATTTT GACTGGGCGA CGGGCAAACT CATGGAGCGG
GCAGAAAGGT TCTGCGATCA CCGGCTAGTG AGTGTGCTTG AAGGTGGATA TGATCTAGAG
GGCTTGTCGC AGTCCGCGTC TACGCATATT ACGCGGCTGT TGAAAGGATG A
|
|---|
| Protein sequence | MTTRLYWHPI YLEHLTPPGH PERPDRIRAL MSELEGPDFY RLDRVEAPRG DEASVLLAHP
EKHLEAIRAE IPEPASDEAA PAPVVKLDGD TYVSPKSLDA ALTAIGAATA AVDDVFSGAA
NNVFVAARPP GHHAERSTAM GFCLFNNIAI AARHAQQRHG AERVAIVDWD VHHGNGTQDI
FRDDPSVLFC STHQFPLYPG TGSKDETGVG NIFNAPLSPD TGSREFREAF NSRVLPALDN
FRPDLILISA GFDAHFRDPL AELNLDEADF DWATGKLMER AERFCDHRLV SVLEGGYDLE
GLSQSASTHI TRLLKG
|
|---|
| |