Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_0454 |
Symbol | |
ID | 5380766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009667 |
Strand | - |
Start bp | 486386 |
End bp | 487300 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640833107 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001369014 |
Protein GI | 153007799 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.532094 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCATATC TTGATAATCT GCGCGTTTTT GTGCGCGTTG TCGAATTGGG AAATCTATCT GCAGCGGGTC GCGACCAGCG CGCTTCGCCA GCAGTTGCAA GCAATCGAAT CAAAGAGTTG GAGAAGCACC TGGGGGTCAG GCTCTTCAAC CGGACGACAC GCAAGCTTAC GCCGACCGAA CACGGTCGCG TATTCTATGA CGGTGCGTTG AAAATCCTCG AAGCTGTGGA TGAGGCGGAA GCTGCCGTGG CTGAACTGGC GAAAAATCCC AAGGGATCGA TTCGCATTAC CGCTCCGCTT GGCTTCGGGA GACGGCTGAT TGCATCGGGA ATTCCGGAGT TTCACGACAA ATATCCGGAT ATCGAAGTAC GGCTTCGCCT GTCCGATCAT GAAGTCGATA TTATGAGCGA AGGCGTCGAT GTGGCTTTCA AGCTCGGCGT TCTGGAGAAT TCGAACCTGC GTATGCGCGG GATCATGAAT TGCGAGCGCG TGATCTGTGC AGCGCCTGCA TATCTCGAGA AACACGGGGT TCCGCAGTCT CCTGACGAGC TGCTTGGCGA CAAGCATGAC TGTCTTCTGC TGCGTTTTCC AGGCTCAAAG GAATATTTCT GGTCCCTGCA AACGGCGGAA GGTCTGCGCA AATTCGAAGT CACCGGGCCA TTTGACTCGG ATGATGGCGA CGTATTGACG CAATGGGCGC TTGGCGGGCG CGGCATCATC AACAAGCCGC TGTTCGAAGT GAAGGAATAT ATCCGTGACG GACGGCTGGT TCCAATCCTC GAAAGCACAC CACCGGCGCC GATCCAGCTT GCTGCGATCT ATCCGCACAA GCGCTTTCAG GACCCAAAGG TACGTCTGAT CATCGATTTC ATGACGGAAC GGTGCCAGCG ATTGATCCGC GAGGCTTTGA TGTAG
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Protein sequence | MSYLDNLRVF VRVVELGNLS AAGRDQRASP AVASNRIKEL EKHLGVRLFN RTTRKLTPTE HGRVFYDGAL KILEAVDEAE AAVAELAKNP KGSIRITAPL GFGRRLIASG IPEFHDKYPD IEVRLRLSDH EVDIMSEGVD VAFKLGVLEN SNLRMRGIMN CERVICAAPA YLEKHGVPQS PDELLGDKHD CLLLRFPGSK EYFWSLQTAE GLRKFEVTGP FDSDDGDVLT QWALGGRGII NKPLFEVKEY IRDGRLVPIL ESTPPAPIQL AAIYPHKRFQ DPKVRLIIDF MTERCQRLIR EALM
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