Gene Oant_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_0400 
Symbol 
ID5378945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009667 
Strand
Start bp426918 
End bp427928 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content56% 
IMG OID640833053 
ProductAraC family transcriptional regulator 
Protein accessionYP_001368960 
Protein GI153007745 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAACTG GAATCGAACG GGATCAGGAC GGGAAGCTTC AAGCGACAAC GGATGCCCCG 
CAGCGCAGGC TATCGGTCGG CATTGTTGCG CTACCGGGCT TTACGCTGAG TGCGCTCAGC
CTTTTCCTCG ATCCTTTTCG CCTTGCTGCC GATGATCGCG ACAAGAGCCG TCAGATACGC
TGCGCATGGA AAATCTGCAC GCTATCAGGA GACCCCGTAA CCTCCAGCTC CGGCATGGTG
ATCGAGCCGA CGGCCCCCAT GGGAGAACTC GACGATTGTG ATTATGTTGC CGTTGTCGGC
GGGCTGCTTG CACAGTATCG GCCGAGGCAG CAGGCACTGA TCGATATCAT CAAGCGTGCG
GACCGGCGCG GCAAGACCGT AGTCGGTCTT TGTACTGCCG CCTTTCTGCT GGCGGAGGCC
GATCTTCTGC CGGACCGCAA TTGCTGCGTC AGCTGGTTCC ATCGTGACGA TTTTCTGGAG
CTTTTCGACG GTTATACAGC CGATACGACC AGCCTGTTTC ACCGCAGCGG AAGACATTTC
ACCTGTGCTG GCGGGCTTGG TACGGCGTCG CTGGCGCTTT CAATCATACA GAACGAGATT
TCCGAGGAAT TGGCGCGCAA GAGCGCATCC ATCCTCATGA TCCCTTATGA GCTTGTACGT
TCCGAACAAC CCGCTCTGAG TTTCAACGGT GTACGCTCGC CGATGATCCG CAAGGCGATC
CGTATTTTTG AGGAAACGCT GGAAGACCCG GTGCCGATGA TCGATGTCGC GCGACGATTG
GGAATTTCTG TCCGCCAGAT GGAGCGTGGT TTCAAACTTG CCCTTGAGCG AACGGCATTC
GAGGTTCGCG AAGAACTTCG GGTTAAAAAG GCCAAGGAAC TTTTATCCGA AACAGGTCTG
TCCCTGCTGG AAGTGGCCGT TGCAAGCGGT TTCACCGATA CGCGCAGCAT GAACCGTTCA
TTTTCGCGGC AAAAACAGAA AGCTCCGCGA GATTACCGCA AACAGCGATA A
 
Protein sequence
MTTGIERDQD GKLQATTDAP QRRLSVGIVA LPGFTLSALS LFLDPFRLAA DDRDKSRQIR 
CAWKICTLSG DPVTSSSGMV IEPTAPMGEL DDCDYVAVVG GLLAQYRPRQ QALIDIIKRA
DRRGKTVVGL CTAAFLLAEA DLLPDRNCCV SWFHRDDFLE LFDGYTADTT SLFHRSGRHF
TCAGGLGTAS LALSIIQNEI SEELARKSAS ILMIPYELVR SEQPALSFNG VRSPMIRKAI
RIFEETLEDP VPMIDVARRL GISVRQMERG FKLALERTAF EVREELRVKK AKELLSETGL
SLLEVAVASG FTDTRSMNRS FSRQKQKAPR DYRKQR