| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_0301 |
|---|
| Symbol | |
|---|
| ID | 5379938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | + |
|---|
| Start bp | 317745 |
|---|
| End bp | 318998 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640832951 |
|---|
| Product | sarcosine oxidase beta subunit family protein |
|---|
| Protein accession | YP_001368861 |
|---|
| Protein GI | 153007646 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | [TIGR01373] sarcosine oxidase, beta subunit family, heterotetrameric form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGTT TTTCTGCAGC TTCTATTATT AAAAATGCGC TTTCCGGCAA CAAGAACTGG
AAGCCGCAAT GGCCGAATGC CGAACCCAAG GCCGAATATG ACGTGATCAT CGTCGGCGCT
GGCGGGCATG GTCTGGGTGC GGCCTATTAT CTGGCCAAGG AACATGGCAT CACCAATGTC
GCGGTCATCG AAAAAGGCTG GCTTGGTGGC GGCAATACCG GGCGCAACAC CACGATTATC
CGCTCCAACT ATCTCTATGA TGAGAGCGCG CATCTTTACG AACATGCGAT GAAGCTGTGG
GAAGGCTTGA GCCAGGACCT CAACTACAAC GTCATGTTCT CGCAGCGCGG CGTGATGATG
CTGGCCCATA CGGTGCATGA TGTGCAGAGC TTCAAGCGTC ACATCCATGC CAATCGTCTC
AACGGCATCG ACAATGAATG GCTGACCAAG GAGCAGGCGA AGGAATATTG TCCGCCGCTC
GATATTTCAG CCAATGCGCG CTATCCGGTT GTTGGCGCCA CCTTGCAGCG GCGCGGCGGC
GTGGCCCGTC ACGATGCGGT TGCCTGGGGC TATGCGCGTG GTGCGACGGA GCGCGGCGTT
GATATCATCC AGAATTGCCC GGTCACGGCC ATCCGCCGTG ATGCATCGGG CCGCGTGACC
GGCGTTGATA CGCCACGTGG TTTCATCAAG GCGAAGAAAG TGGCGGTTTC TGCTGCTGGC
AGCACGTCCA TTGTCATGGA TACAGCAGGC GTGCGTATGC CGCTTGAAAG CTTCCCGCTA
CAGGCGCTGG TGTCCGAGCC GGTCAAGCCG ATCTTCCCAT GTGTGGTCAT GTCCAACACG
GTTCATGCCT ATATCAGCCA GTCCGACAAG GGCGAGCTGG TGATCGGTTC CGGCACTGAC
CAATATGTGT CCTACAGCCA GCGCGGCGGC CTGCCGCTGA TCGAGCATAC GCTTGCGGCC
ATCTGCGAAG TCTTCCCGAT CTTCACCCGT ATGCGGATGC TGCGCAAATG GGGCGGTATT
GTTGATGTCA CGCCGGATCG TTCGCCGATT ATCGGCAAGA CGCCGGTGCC GGGCCTCTTC
GTGAATTGCG GCTGGGGCAC GGGCGGCTTC AAGGCGACAC CGGGTTCGGC GCATGTTTTT
GCGCATACAA TTGCCCGCGA CGAACCACAC TGGATCAACG CACCCTTCAC GCTTGAACGC
TTCACCACCG GTCGCCTGAT CGATGAAGCG GCTGCTGCCG CCGTGGCTCA CTAA
|
|---|
| Protein sequence | MSRFSAASII KNALSGNKNW KPQWPNAEPK AEYDVIIVGA GGHGLGAAYY LAKEHGITNV
AVIEKGWLGG GNTGRNTTII RSNYLYDESA HLYEHAMKLW EGLSQDLNYN VMFSQRGVMM
LAHTVHDVQS FKRHIHANRL NGIDNEWLTK EQAKEYCPPL DISANARYPV VGATLQRRGG
VARHDAVAWG YARGATERGV DIIQNCPVTA IRRDASGRVT GVDTPRGFIK AKKVAVSAAG
STSIVMDTAG VRMPLESFPL QALVSEPVKP IFPCVVMSNT VHAYISQSDK GELVIGSGTD
QYVSYSQRGG LPLIEHTLAA ICEVFPIFTR MRMLRKWGGI VDVTPDRSPI IGKTPVPGLF
VNCGWGTGGF KATPGSAHVF AHTIARDEPH WINAPFTLER FTTGRLIDEA AAAAVAH
|
|---|
| |