| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_0294 |
|---|
| Symbol | |
|---|
| ID | 5378736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | + |
|---|
| Start bp | 309280 |
|---|
| End bp | 311610 |
|---|
| Gene Length | 2331 bp |
|---|
| Protein Length | 776 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640832944 |
|---|
| Product | Pyrrolo-quinoline quinone |
|---|
| Protein accession | YP_001368854 |
|---|
| Protein GI | 153007639 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4993] Glucose dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTAGAAG GGGGTAATGT CTTGCTTATC TGGTTAACTT CTATTGTTCT TTTCCTGATC
GGGCTTGCGC TCGGCGCGGG AGGCATCTGG CTCGCCGCAC TCGGCGGCAG CTGGTATTAC
ATACTCGCAG CGATCGGCTT TCTGCTGACC GCCGTTTTGC TTTCCCGGCG CAGCGCCACA
GCATTATGGG TCTATGCGCT TGTCATTCTT GGATCGCTCG GCTGGGCCGT TTATGAAGTC
GGCTTCGATT GGTGGCAGCT TGGCGCACGC GGCGGCATCA TCGTGCTGCT CGGCTTCTGG
ATGCTGACGC CCTGGATCAG GAAACCATTG AATAACGGAG CAGGCGATAG TGGTCTGCCG
CTGGCCGCAG CCTCGGTGAT CGCAGTTGTG GTCGCAGGCT ATGCGATAAC ACAGGATAGC
TACAATATTG CCGGAGACCT GCCGACGGAG AAGGTCGCTG CAACGCCCGA TCTTGGCGGC
AACATGCCCG ATGGTGAATG GCATCAATAT GGTCGAACGC CTTACGGTCA GCGCTATTCG
CCACTGGCAC AGATAACGCC GGAGAATGTC TCCAAGCTTC AGGTTGCCTG GCAGTATCAG
ACCGGCGATG TGAAGCAGCC GCAGGATGTG GGCGAAACGA CCTATCAGGT CACGCCGCTC
AAGATCGGCG ATTCCCTTTA TCTCTGCACG CCGCATAACT GGGCAATCGC GCTGGATGCG
GCGACCGGCA AGGAAAAGTG GAAATTCGAT CCCAAGGTCG GTTTCAATAC AGACCGCCAG
CACCAGACCT GCCGTGGTGT GAGCTACTGG AAAGATGCGA CCGCAACAGC TGGAGCGAAA
TGCTCCGAGC GTGTCTATTT GCCGACATCT GACGCACGAT TGATCGCACT GGATACGGCC
ACCGGAGAAA TCTGCACGGA TTTCGCCAAT GGTGGAACTC TCGATCTCAG CCACGGCATG
AAATACAATC CGGCAGGGTA TTACTACTCC ACTTCACCCC CTGCGGTCGT CGGCGACAAG
ATCATCGTTG GCGGTGCCGT CAACGATAAT TATTCGACGG AAGAACAGTC CGGCGTCATT
CGCGCATTCG ATATCCGCAC TGGCCAACTG CTGTGGAACT GGGATTCGGG CAATCCGGAT
GTCACCACGC CGCTGCCGGA GGGGGAGCAC TACACGACCA ACTCACCCAA CAGCTGGTCC
GTTTCAAGCG TCGATGAGAA GCTTGGGCTG ATATTTGTTC CGCTCGGCAA CAAGGTGCCC
GACCAGCTTG GTATGGACCG CAGCGAGAAT GTGGAGAAGT TTTCCTCGTC CATCGTCGCT
CTCGATGTGA ATACCGGACA GCTTCGCTGG GTGCGCCAGA CTGTTCACCA TGATCTATGG
GATATGGACG TTCCAGCCCA GCCGGTCCTG CTGGAAATCA ACGGGGTTCC GGCACTGGTC
GGACCGACGA AGCAGGGCGA TCTCTATGTT CTGGATCGAC GCACTGGCGA GCCGATCATT
CCAGTCAGGG AAATTCCAGC TCCGACAGGC GCGATACCCG AGGACCATAC TGCGCCGACG
CAGCCGATCT CCGATCTTAC TTTCAGTCCG CCACCCTTGC GCGAAAGCGA CATGTGGGGT
GTGACGATGT TCGATCAGCT CGCTTGTCGT ATCAAGTTCC ACGAGCTGTT CTATGAAGGC
CGATATACCC CGCCTTCGCT GCGCGGAACG ATTGTCTATC CGGGCAATTT CGGTGTGTTC
AACTGGGGCA GCGTGGCCGT CGATCCGGTG CGGCAAGTCA TGTTCGGTAT GCCGACCTAT
CTCGCCTTCA CCTCGCGCCT CGTTCCACGC GCGGACATTC CGCCGAAAGG ACAGGATGAA
AAGGGAAGCG AGCAGGGCTT GAACCGCAAC GACGGCGCGC CTTATGGCGT CTTCATGGGA
CCATTCCTGG GTCCGCTCGG TATTCCCTGC CAGACGCCGC CATGGGGTTA TGTCGCTGGT
GTTGACTTGC GAACCGGTAA GATTGCCTAC AAACATCGGA ATGGAACGAT CCGCGATATG
TCACCGGTTC CACTTCCGCT GAAGGTCGGC GTCCCGGGCA TTGGCGGACC GATGATCACC
GCAGGCGGCG TTGCCTTCCT TGGTGCAGCC GTGGATGATT ATCTGCGCGC CTATGACCTG
ACTTCGGGCA AGCAGCTCTG GGAAGCACGG CTTCCTGCTG GCGGGCAGTC GACGCCAATG
AGCTATACGG TCGGCGATCA GCAATTCGTT CTGATGGTTG CCGGCGGGCA TGGTTCTGTT
GGCACCAAGC CCGGCGATTA CGTGATCGCC TATACTCTGC CGAAAGGCTG A
|
|---|
| Protein sequence | MLEGGNVLLI WLTSIVLFLI GLALGAGGIW LAALGGSWYY ILAAIGFLLT AVLLSRRSAT
ALWVYALVIL GSLGWAVYEV GFDWWQLGAR GGIIVLLGFW MLTPWIRKPL NNGAGDSGLP
LAAASVIAVV VAGYAITQDS YNIAGDLPTE KVAATPDLGG NMPDGEWHQY GRTPYGQRYS
PLAQITPENV SKLQVAWQYQ TGDVKQPQDV GETTYQVTPL KIGDSLYLCT PHNWAIALDA
ATGKEKWKFD PKVGFNTDRQ HQTCRGVSYW KDATATAGAK CSERVYLPTS DARLIALDTA
TGEICTDFAN GGTLDLSHGM KYNPAGYYYS TSPPAVVGDK IIVGGAVNDN YSTEEQSGVI
RAFDIRTGQL LWNWDSGNPD VTTPLPEGEH YTTNSPNSWS VSSVDEKLGL IFVPLGNKVP
DQLGMDRSEN VEKFSSSIVA LDVNTGQLRW VRQTVHHDLW DMDVPAQPVL LEINGVPALV
GPTKQGDLYV LDRRTGEPII PVREIPAPTG AIPEDHTAPT QPISDLTFSP PPLRESDMWG
VTMFDQLACR IKFHELFYEG RYTPPSLRGT IVYPGNFGVF NWGSVAVDPV RQVMFGMPTY
LAFTSRLVPR ADIPPKGQDE KGSEQGLNRN DGAPYGVFMG PFLGPLGIPC QTPPWGYVAG
VDLRTGKIAY KHRNGTIRDM SPVPLPLKVG VPGIGGPMIT AGGVAFLGAA VDDYLRAYDL
TSGKQLWEAR LPAGGQSTPM SYTVGDQQFV LMVAGGHGSV GTKPGDYVIA YTLPKG
|
|---|
| |