Gene Oant_0286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_0286 
Symbol 
ID5380409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009667 
Strand
Start bp296715 
End bp298838 
Gene Length2124 bp 
Protein Length707 aa 
Translation table11 
GC content54% 
IMG OID640832936 
Productdiguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) 
Protein accessionYP_001368846 
Protein GI153007631 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGAAGC GGAGGGGCGC TTCAGCTTCG ACGGAAGGCA CGATGGCGCG CACGTCCGAG 
CAGGACTTCC GCATCCTTTT CACAACCCAT CCGACACCGA TGTGGGTTTA TGACCCGGAG
ACGCTGCATT TCATCGTGAT GAATGACGCT GCCTATCGGC TCTATGGATA CACTGCTGAT
GAAATTCCGG GCATGACAGT GCTCGATATT CGACCCCAGA CAGAACGGGA TCGAATGCTG
GCTGCCATTC GTGATCGCAG CGACCTTGAA CGACCGGAGC GCTGGCAGCA TCTGCGCGCG
AATGGTGAAA TCATTGACGT TCTGACTTAC GGACGTCAGG TGCTGTTTGA CGGCAAGGAA
GCGATTCTCG CCATTGTTCA GGACAGGACA GAGTTGGCAG AAGCCAATCG TCAGGCAAAC
CACGCCCAAA CCTTGCTGGA CAGCCTCGTC AACAATCTGC CGCTTGGTGT CTTCGTCAAG
GATATGCACG ATGACGGTCG GTATGTGCTC TACAATCAGG CCGCATCAGC GGCGAGCGGA
CAGCCGGTAG ACGAAGCCAT CGGTTCGACC GACCTCGATC TTTTCCCTGA ACGCGAGGCA
ACCGTCATCA TCCAGCAAGA TCGCACGGCG ATGCGGCGTC GGGGCGTGTT GAACGTCGAA
CGCAAGATCG AGCGCAAGGA CGGAACGTCG CGAACGATGC GGATCATAAA ATGTTCGATC
CCACCGGTCG AAGGCAACGA GCCCCGCTAT TTGATCGGGC TTGTTGAGGA TATAACCGAA
CGGCGTGAGA TTGAGGAACG CATGGCACAT ATTGCCATGC ATGACAGTCT GACAGGCTTG
CCGAACCGCG CCTATTTTGC TCACCATGTA GAGAGTTTGT TGAAAAAGGG CGGGGATTCC
GAGCCTTTTG CCTTGTTCTA CCTTGATATC GATCATTTCA AGAACATCAA CGACAATATA
GGGCATCAGG CTGGCGACCA GCTTTTGCAG GAAGTGGCGC GTCGACTGAA GCAGATCACG
ACTTCGGATG AATTCATTGC CCGGCTGGGA GGCGACGAAT TTGCCATTGT CTACCGGAGC
GGGACACTGG CACAAATTGC AATGTTCGCT GACCGTATCC TTTCTGCTTT TCAGGATCCG
TTCGAACTGG TGCGCAATTC AGAATTCGTC GCCTGCAGCA TGGGCATCGC CCAGGCGCCA
TTGCATGGAG ACAACCCCGA CGTGCTGATG CGCAATGCCG ATCTCGCGCT TTATGCTTCA
AAATCAGGTG GACGCCGTAC ATTCCGGTTC TATCAGCACT CCCTGCGCCT GGCGGCGGAG
AAGCGTTATG TCATGACCGG CGAACTTCGT CAGGCTCTGC TGGATGAACA GTTTGAACTG
CATTATCAAC CGATTTTCAA TCTTGAGAGC GGCAAGATTT CCGGCTTTGA AGCGCTGATC
CGCTGGCGTC ATCCTGATCG CGGTATGGTT TCACCGGCGG AATTCATTCC ACTGGCAGAA
GAAACCGGGC TCATCGGACC GATCGGCGAC TGGGTTTTAA GGACTGCATG TCGGGAAGCT
GTGCTCTGGC CGGAGGACAT AAAAGTCTCG GTCAATCTTT CACCGGTCCA GTTCAGTCAG
ACCACGCTCT TGCATTCCGT CACGGATGCG TTGGAAGCAG CGCGTCTTTC ACCCGACAGG
CTTGAGCTTG AAATCACGGA GTCGGTCTTC CTGTCGAACA GCAAGAACAA TATCGAGTTG
CTGTTCGAAC TTCGCCGATT GGGTGTTCGT ATCGCGATGG ATGATTTCGG GACCGGCTAT
TCCTCTTTGA GCTATTTGCG ATCATTCCCA TTTGATAAGA TCAAGATTGA TCGCAGTTTC
GTTTCAGGGA TCGAAGTCGA TACGCGCGAT CTGGCCATCA TTCAGGCTGT GGCAACGCTC
GGTGCTGGCT TCAATATTGT CACGACGGCC GAGGGCGTGG AAACCGCACA ACAGTTGGAA
CGTTTGAAGA CCGAGCGTTT TGGCGAAGTG CAGGGTTTTC TGACCGGGCG GCCAATGCCT
GCCGGAGACG TGCATTCCTT TATCCAGAAT CGCAGCAATG TCGGTCTGGA AATGCCTGCA
GCACACAACA GATTACCGAT TTAG
 
Protein sequence
MRKRRGASAS TEGTMARTSE QDFRILFTTH PTPMWVYDPE TLHFIVMNDA AYRLYGYTAD 
EIPGMTVLDI RPQTERDRML AAIRDRSDLE RPERWQHLRA NGEIIDVLTY GRQVLFDGKE
AILAIVQDRT ELAEANRQAN HAQTLLDSLV NNLPLGVFVK DMHDDGRYVL YNQAASAASG
QPVDEAIGST DLDLFPEREA TVIIQQDRTA MRRRGVLNVE RKIERKDGTS RTMRIIKCSI
PPVEGNEPRY LIGLVEDITE RREIEERMAH IAMHDSLTGL PNRAYFAHHV ESLLKKGGDS
EPFALFYLDI DHFKNINDNI GHQAGDQLLQ EVARRLKQIT TSDEFIARLG GDEFAIVYRS
GTLAQIAMFA DRILSAFQDP FELVRNSEFV ACSMGIAQAP LHGDNPDVLM RNADLALYAS
KSGGRRTFRF YQHSLRLAAE KRYVMTGELR QALLDEQFEL HYQPIFNLES GKISGFEALI
RWRHPDRGMV SPAEFIPLAE ETGLIGPIGD WVLRTACREA VLWPEDIKVS VNLSPVQFSQ
TTLLHSVTDA LEAARLSPDR LELEITESVF LSNSKNNIEL LFELRRLGVR IAMDDFGTGY
SSLSYLRSFP FDKIKIDRSF VSGIEVDTRD LAIIQAVATL GAGFNIVTTA EGVETAQQLE
RLKTERFGEV QGFLTGRPMP AGDVHSFIQN RSNVGLEMPA AHNRLPI