Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_0286 |
Symbol | |
ID | 5380409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009667 |
Strand | + |
Start bp | 296715 |
End bp | 298838 |
Gene Length | 2124 bp |
Protein Length | 707 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640832936 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
Protein accession | YP_001368846 |
Protein GI | 153007631 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGAAGC GGAGGGGCGC TTCAGCTTCG ACGGAAGGCA CGATGGCGCG CACGTCCGAG CAGGACTTCC GCATCCTTTT CACAACCCAT CCGACACCGA TGTGGGTTTA TGACCCGGAG ACGCTGCATT TCATCGTGAT GAATGACGCT GCCTATCGGC TCTATGGATA CACTGCTGAT GAAATTCCGG GCATGACAGT GCTCGATATT CGACCCCAGA CAGAACGGGA TCGAATGCTG GCTGCCATTC GTGATCGCAG CGACCTTGAA CGACCGGAGC GCTGGCAGCA TCTGCGCGCG AATGGTGAAA TCATTGACGT TCTGACTTAC GGACGTCAGG TGCTGTTTGA CGGCAAGGAA GCGATTCTCG CCATTGTTCA GGACAGGACA GAGTTGGCAG AAGCCAATCG TCAGGCAAAC CACGCCCAAA CCTTGCTGGA CAGCCTCGTC AACAATCTGC CGCTTGGTGT CTTCGTCAAG GATATGCACG ATGACGGTCG GTATGTGCTC TACAATCAGG CCGCATCAGC GGCGAGCGGA CAGCCGGTAG ACGAAGCCAT CGGTTCGACC GACCTCGATC TTTTCCCTGA ACGCGAGGCA ACCGTCATCA TCCAGCAAGA TCGCACGGCG ATGCGGCGTC GGGGCGTGTT GAACGTCGAA CGCAAGATCG AGCGCAAGGA CGGAACGTCG CGAACGATGC GGATCATAAA ATGTTCGATC CCACCGGTCG AAGGCAACGA GCCCCGCTAT TTGATCGGGC TTGTTGAGGA TATAACCGAA CGGCGTGAGA TTGAGGAACG CATGGCACAT ATTGCCATGC ATGACAGTCT GACAGGCTTG CCGAACCGCG CCTATTTTGC TCACCATGTA GAGAGTTTGT TGAAAAAGGG CGGGGATTCC GAGCCTTTTG CCTTGTTCTA CCTTGATATC GATCATTTCA AGAACATCAA CGACAATATA GGGCATCAGG CTGGCGACCA GCTTTTGCAG GAAGTGGCGC GTCGACTGAA GCAGATCACG ACTTCGGATG AATTCATTGC CCGGCTGGGA GGCGACGAAT TTGCCATTGT CTACCGGAGC GGGACACTGG CACAAATTGC AATGTTCGCT GACCGTATCC TTTCTGCTTT TCAGGATCCG TTCGAACTGG TGCGCAATTC AGAATTCGTC GCCTGCAGCA TGGGCATCGC CCAGGCGCCA TTGCATGGAG ACAACCCCGA CGTGCTGATG CGCAATGCCG ATCTCGCGCT TTATGCTTCA AAATCAGGTG GACGCCGTAC ATTCCGGTTC TATCAGCACT CCCTGCGCCT GGCGGCGGAG AAGCGTTATG TCATGACCGG CGAACTTCGT CAGGCTCTGC TGGATGAACA GTTTGAACTG CATTATCAAC CGATTTTCAA TCTTGAGAGC GGCAAGATTT CCGGCTTTGA AGCGCTGATC CGCTGGCGTC ATCCTGATCG CGGTATGGTT TCACCGGCGG AATTCATTCC ACTGGCAGAA GAAACCGGGC TCATCGGACC GATCGGCGAC TGGGTTTTAA GGACTGCATG TCGGGAAGCT GTGCTCTGGC CGGAGGACAT AAAAGTCTCG GTCAATCTTT CACCGGTCCA GTTCAGTCAG ACCACGCTCT TGCATTCCGT CACGGATGCG TTGGAAGCAG CGCGTCTTTC ACCCGACAGG CTTGAGCTTG AAATCACGGA GTCGGTCTTC CTGTCGAACA GCAAGAACAA TATCGAGTTG CTGTTCGAAC TTCGCCGATT GGGTGTTCGT ATCGCGATGG ATGATTTCGG GACCGGCTAT TCCTCTTTGA GCTATTTGCG ATCATTCCCA TTTGATAAGA TCAAGATTGA TCGCAGTTTC GTTTCAGGGA TCGAAGTCGA TACGCGCGAT CTGGCCATCA TTCAGGCTGT GGCAACGCTC GGTGCTGGCT TCAATATTGT CACGACGGCC GAGGGCGTGG AAACCGCACA ACAGTTGGAA CGTTTGAAGA CCGAGCGTTT TGGCGAAGTG CAGGGTTTTC TGACCGGGCG GCCAATGCCT GCCGGAGACG TGCATTCCTT TATCCAGAAT CGCAGCAATG TCGGTCTGGA AATGCCTGCA GCACACAACA GATTACCGAT TTAG
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Protein sequence | MRKRRGASAS TEGTMARTSE QDFRILFTTH PTPMWVYDPE TLHFIVMNDA AYRLYGYTAD EIPGMTVLDI RPQTERDRML AAIRDRSDLE RPERWQHLRA NGEIIDVLTY GRQVLFDGKE AILAIVQDRT ELAEANRQAN HAQTLLDSLV NNLPLGVFVK DMHDDGRYVL YNQAASAASG QPVDEAIGST DLDLFPEREA TVIIQQDRTA MRRRGVLNVE RKIERKDGTS RTMRIIKCSI PPVEGNEPRY LIGLVEDITE RREIEERMAH IAMHDSLTGL PNRAYFAHHV ESLLKKGGDS EPFALFYLDI DHFKNINDNI GHQAGDQLLQ EVARRLKQIT TSDEFIARLG GDEFAIVYRS GTLAQIAMFA DRILSAFQDP FELVRNSEFV ACSMGIAQAP LHGDNPDVLM RNADLALYAS KSGGRRTFRF YQHSLRLAAE KRYVMTGELR QALLDEQFEL HYQPIFNLES GKISGFEALI RWRHPDRGMV SPAEFIPLAE ETGLIGPIGD WVLRTACREA VLWPEDIKVS VNLSPVQFSQ TTLLHSVTDA LEAARLSPDR LELEITESVF LSNSKNNIEL LFELRRLGVR IAMDDFGTGY SSLSYLRSFP FDKIKIDRSF VSGIEVDTRD LAIIQAVATL GAGFNIVTTA EGVETAQQLE RLKTERFGEV QGFLTGRPMP AGDVHSFIQN RSNVGLEMPA AHNRLPI
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