| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_0182 |
|---|
| Symbol | rph |
|---|
| ID | 5379214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | + |
|---|
| Start bp | 202401 |
|---|
| End bp | 203117 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640832831 |
|---|
| Product | ribonuclease PH |
|---|
| Protein accession | YP_001368742 |
|---|
| Protein GI | 153007527 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0689] RNase PH |
|---|
| TIGRFAM ID | [TIGR01966] ribonuclease PH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCCAT CCAAGCGTGC GGCTGACGAA ATGCGTGCCG TTTCTTTCGA ACGCGGCATC
TCCAAACATG CCGAGGGCTC CTGCCTCGTC AAGTTTGGCG ATACGCATGT GTTGTGCACC
GCAAGCCTTG AGGAAAAGGT GCCGGGCTGG ATGCGCAATA CGGGCAAGGG CTGGGTCACG
GCGGAATACG GCATGCTGCC GCGTTCGACC GGCGACCGCA TGCGCCGCGA AGCCGCTGCC
GGTAAGCAGG GCGGACGCAC GCAGGAAATC CAGCGTCTGA TCGGACGCTC CTTGCGCGCC
GTCGTGGACA TGCAGGCACT TGGCGAAGTA CAGATCACGG TAGATTGCGA TGTCATTCAG
GCCGATGGCG GCACGCGGAC GGCAGCCATC ACCGGCGGCT GGGTAGCGCT TCATGAATGC
CTGCGCTGGA TGGAAGCGCG CCAGATGGTG CGCGTCGAGA AGGTTCTGAA AGATCATATC
GCGGCGATTT CCTGCGGCAT CTACGAGGGT GAGCCTGTGC TTGATCTGGA CTATGCCGAA
GACTCTGTCG CCGAGACCGA CAGCAATTTC GTGATGACCG GCAAGGGCGG AATTGTCGAA
ATTCAGGGAA CGGCGGAAGG TGCGCCTTTC TCGGAAGAAG AGTTTGCCAA TCTGATGAAG
CTGGCTCGCG GCGGCATTGA TCGCCTTGTG TCCTTGCAGA AGATGGCCGT CGCCTGA
|
|---|
| Protein sequence | MRPSKRAADE MRAVSFERGI SKHAEGSCLV KFGDTHVLCT ASLEEKVPGW MRNTGKGWVT
AEYGMLPRST GDRMRREAAA GKQGGRTQEI QRLIGRSLRA VVDMQALGEV QITVDCDVIQ
ADGGTRTAAI TGGWVALHEC LRWMEARQMV RVEKVLKDHI AAISCGIYEG EPVLDLDYAE
DSVAETDSNF VMTGKGGIVE IQGTAEGAPF SEEEFANLMK LARGGIDRLV SLQKMAVA
|
|---|
| |