Gene Oant_0172 details

Gene Information

• Locus tag: Oant_0172
• ID: 5379918
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ochrobactrum anthropi ATCC 49188
• Kingdom: Bacteria
• Replicon accession: NC_009667
• Strand: +
• Start bp: 194184
• End bp: 194648
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 640832821
• Product: PTS IIA-like nitrogen-regulatory protein PtsN
• Protein accession: YP_001368732
• Protein GI: 153007517
• COG category: [G] Carbohydrate transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)
• TIGRFAM ID: [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.322963
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATCTTA GTGATCTGAT TCAGCCTGGG GCGATTATCC CGGCGCTGAA AGCCAGCTCC 
AAAAAACAGC TTTTGCAGAT TCTGTCTGAA AAGGCTGCGG AACTGACCGG TCTCCCTGAG 
CGTGAAGTTT TCGAAACAAT TCTCCAGCGT GAGCGCCTCG GTTCTACCGG GGTGGGCAAT 
GGCGTTGCCA TTCCGCACGG CAAGCTGGCG AACATCAACA AAATAGCCGG AATCTTCGCT 
CGTCTGGAAA CCCCGGTCGA TTTCGAGGCG CTGGACGATC AACCCGTCGA TCTTGTTTTT 
CTGCTTCTCG CGCCGGAGAA TGCCGGCGCG GATCACCTGA AGGCACTCTC GCGCATCGCC 
CGTATGCTGC GCGATGCCGA TACGGTTGCC AAATTGCGCG GCACACATGA CGCGCAGGCG 
CTCTATTCAT TCCTGACAGC TCAGCCTGCT TCCAACGCCG CCTGA 

 

Protein sequence

MDLSDLIQPG AIIPALKASS KKQLLQILSE KAAELTGLPE REVFETILQR ERLGSTGVGN 
GVAIPHGKLA NINKIAGIFA RLETPVDFEA LDDQPVDLVF LLLAPENAGA DHLKALSRIA 
RMLRDADTVA KLRGTHDAQA LYSFLTAQPA SNAA