| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_0079 |
|---|
| Symbol | dnaE2 |
|---|
| ID | 5378880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ochrobactrum anthropi ATCC 49188 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009667 |
|---|
| Strand | - |
|---|
| Start bp | 85494 |
|---|
| End bp | 88727 |
|---|
| Gene Length | 3234 bp |
|---|
| Protein Length | 1077 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640832728 |
|---|
| Product | error-prone DNA polymerase |
|---|
| Protein accession | YP_001368639 |
|---|
| Protein GI | 153007424 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0587] DNA polymerase III, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCCTT ATTTCGAAAT GGCTGCTGCC AGCAATTTCT CCTTCCTGTG CGGTGCGTCG
CATCCGCAGG AACTGGTAGC GCGTGCGCAT GAGCTTGGTC TGTCCGGTAT CGGCATTGCC
GACCGCAACA CGCTGGCCGG TGTGGTGCGG GCACATGCGG CATGGAAGGA TTTTCGCGAC
AAGAGCGATT TCCGGCTTTT CATCGGCTGT CGCCTGTCCT TCACCGACGG CACGCCGGAT
ATGGTCGTCT ATCCGCGTGA TCGTCCGGCC TATGGGCAAT TGTGCCGCCT GCTGACGGAG
GGCAAGGCAC GCGCCGCCAT CAAGGGCGAA TGCCATCTCG AATGGGGCGA CCTGCTGTTT
CGCGCCCGAC AGTTCCAGAT CGCGGTCTTT CCGCCTGAAG ACGACAGACC GGATTTTGCC
GCGCGCCTGA CCGAGATTGC GCAAGCTGCC CCCGGCTCGG TCTGGTTGGC GCTCGCCATG
CCGCATCAGG GCCATGACGG ACGCCGGGCC GAACGCATCG CCCGTTTTGC AGCCGAAGCC
AATGTGCCGC TGCTCGCCAC CAATGACGTG CTCTATCATC ATCCCGACCG CCGCGCGCTT
CAGGATGTGC TGACGGCAAC CCGCTACCAC ACGACTGTTT TCGCAGCCGG GCAGCTTCTC
GAAAAGAACG CCGAACGCCA CCTGAAACCA CCAAAGGAAA TGCTGCGGCT GTTCCGCGAC
TACGCTGAAG CAGTCGAGGC TACCGCCGAT TTCGTCGCGC CCATCACCTT CCAGCTTGAT
GAGCTGAAAT ATGATTATCC CGACGAGCCG GTGCCGCCCG GCAAGACGCC GCAACAACAT
CTGCATGATC TCACCTGGGA AGGTGCCGCT CGTCATTACG GCGCTAACAG CATCCCGCCG
AAGGTGCAGA CGCTGATCCA CAAGGAACTG GCGCTGATCG AAAAGCTGCA ATATGCGGCT
TACTTTCTCA CGGTTTATGA CATTGTGAGC TATGCCCGCC GAGAAGATAT TCTGTGTCAG
GGGCGTGGTT CGGCCGCCAA TTCCGTCGTC TGCTTCTGCC TTGGCGTCAC CGGTGTGGAC
CCGACACAGG TCGATCTCCT GTTCGAGCGC TTTCTTTCGG TGGAGCGAAA GGAACCGCCG
GATATCGACG TCGATTTCGA GCATGAGCGG CGCGAAGAGG TGATGCAATA TGTCTATAAG
CGCTATTCCA GAGATCGCGC GGCCATTGTC GCAACCGTCA TCAGCTATCG GTCCCGCAGT
GCGATCCGCG ATGTCGGCAA GGCGCTGGGG CTGACTGAGG ATGTGACGGC AGCGCTCGCC
AATACGGTCT GGGGCATATC GGGCGGCGGC ATCGACAAGC AGCATATCAG ACAGGCGGGT
CTCGACCCCG ACAATCCCAT CATCCGACGC GCGGTGGAAC TGGCCATCAC GCTGATCGGC
TTTCCGCGCC ACCTGTCCCA GCATGTCGGC GGCTTCGTGC TGACCCGTGA TCGACTGGAC
GAGACCGTGC CCATCGGCCC GGCGGCGATG GAAGACCGCT CCTTCATCGA ATGGGACAAG
GACGATATCG ACGAGGTGGG GCTGATGAAG GTCGATGTGC TGTCGCTCGG CATGCTCACC
TGCATCCGCA AGGCCTTTGA TCTCATTCAC CAGCACAAGC CGGAAAAATA TGATGGCAAG
AAGCTGACGC TGGCCAATTT GCCGCGCGAA GACGAAGCCG TGTACGACAT GCTGTGCAAG
GGAGATTCGC TCGGCGTGTT TCAAGTGGAA AGCCGCGCCC AGATGAACAT GCTGCCACGC
CTGCGCCCGC GTGAGTTCTA TGATCTCGTC ATCGAGGTCG CCATTGTGCG GCCCGGCCCC
ATTCAGGGTG ACATGGTCCA TCCCTATCTG CGGCGGCGAA ACAATGAGGA ACCCTGCACC
TTGCCATCGC CAGCGCCGGA GTACGGGCCG CCCGACGAGT TGCTACAAAT TCTCGGTAAG
ACCAAGGGCG TGCCGCTGTT TCAGGAACAG GCGATGCGCA TTGCCATGGA GGCTGCAAAA
TTCACACCGG ATGAGGCCAA CCAGTTGCGC CGCGCCATGG CCACTTTCCG CAAGATGGGC
ACCATCCATA CGATGGAGAC AAAGATGATC GAAGGCATGG TCAATCGTGG CTATGACCGG
ACCTTTGCCG AAAACTGCTT CAACCAGATC AAGGGTTTCG GCGAATATGG CTTTCCCGAA
AGTCATGCGG CAAGCTTTGC CCATCTGGTC TATATTTCCG CGTGGATCAA GTGCCACCAT
CCGGAAGTGT TCGCCGCCGC GCTTCTCAAT TCCCAACCCA TGGGTTTTTA CGCACCCGCC
CAGATCGTGC GCGATGCCCG CGAGCATGGC GTGACGGTGC TGCCCGTCGA TGTTAATTTC
AGTCACTGGG ATAATATGCT GGAGGATACG CTCGATATCC GACCGGCGCT CCGGCTGGGT
TTCCGCCAGA TCGACGGGTT TTCCAAACGG GACACCGAAC TCCTGATTGC CGACCGGCAG
GAGCCTTACC GCACCATCGA GGACATGCAT CGGCGTCTCC GGCTCGACCG GCGCGCCTTC
ACGCTTTTGG CCGATGCCGA TGCCTTCGGC TCACTCGATA TCGACCGCCG CGCAGCACTG
TGGGCCGTGC GCCGTCTGCC CAATGACGAA ACGCTGCCGC TGTTCCGCGC CGCCGCAACC
AGCGAACTGG CGGAGGAACC GCGCACAAAA CTTCCTGAAA TGGCCGCTTC CGAGCATGTG
ATTGCCGATT ACGAGACGAC GCGGCTCTCG CTGAAAGGGC ATCCGCTGCA ATATCTGCGC
GAGGGTCTGG CAGCGGAAGG CGTTTCAACC TGTCGCGCAG TGCAGGAAGG TGCCGATGGA
CGCCGCATGA AAGTGGCGGG CGTCGTCACC GTGCGCCAGC GCCCCGGCAG CGCCAAGGGC
GTGGTGTTTC TCACCATCGA GGATGAAACC GGCATCGCCA ATATTGTCGT CTGGCCGAAA
ATCATGAAAG CGTTTCGCCG CGAAGTAATG GGCGCGCGGC TGATCCATAT CGAAGGTCGC
CTCCAGCGCA GTCCCGAAGG GGTCGTGCAT CTGGTGGCGT CAAAGCTGCA GGATCGTTCG
GCAGCACTGA TCGAAATGAG CGGACGCGAA GCGCAGCGCC TCGTCGCTCC ATCCCAGATG
GCGCATCATC CGCGGAATGT AAAAATCATG CCGAACTCGC GAGACTTTCA TTGA
|
|---|
| Protein sequence | MAPYFEMAAA SNFSFLCGAS HPQELVARAH ELGLSGIGIA DRNTLAGVVR AHAAWKDFRD
KSDFRLFIGC RLSFTDGTPD MVVYPRDRPA YGQLCRLLTE GKARAAIKGE CHLEWGDLLF
RARQFQIAVF PPEDDRPDFA ARLTEIAQAA PGSVWLALAM PHQGHDGRRA ERIARFAAEA
NVPLLATNDV LYHHPDRRAL QDVLTATRYH TTVFAAGQLL EKNAERHLKP PKEMLRLFRD
YAEAVEATAD FVAPITFQLD ELKYDYPDEP VPPGKTPQQH LHDLTWEGAA RHYGANSIPP
KVQTLIHKEL ALIEKLQYAA YFLTVYDIVS YARREDILCQ GRGSAANSVV CFCLGVTGVD
PTQVDLLFER FLSVERKEPP DIDVDFEHER REEVMQYVYK RYSRDRAAIV ATVISYRSRS
AIRDVGKALG LTEDVTAALA NTVWGISGGG IDKQHIRQAG LDPDNPIIRR AVELAITLIG
FPRHLSQHVG GFVLTRDRLD ETVPIGPAAM EDRSFIEWDK DDIDEVGLMK VDVLSLGMLT
CIRKAFDLIH QHKPEKYDGK KLTLANLPRE DEAVYDMLCK GDSLGVFQVE SRAQMNMLPR
LRPREFYDLV IEVAIVRPGP IQGDMVHPYL RRRNNEEPCT LPSPAPEYGP PDELLQILGK
TKGVPLFQEQ AMRIAMEAAK FTPDEANQLR RAMATFRKMG TIHTMETKMI EGMVNRGYDR
TFAENCFNQI KGFGEYGFPE SHAASFAHLV YISAWIKCHH PEVFAAALLN SQPMGFYAPA
QIVRDAREHG VTVLPVDVNF SHWDNMLEDT LDIRPALRLG FRQIDGFSKR DTELLIADRQ
EPYRTIEDMH RRLRLDRRAF TLLADADAFG SLDIDRRAAL WAVRRLPNDE TLPLFRAAAT
SELAEEPRTK LPEMAASEHV IADYETTRLS LKGHPLQYLR EGLAAEGVST CRAVQEGADG
RRMKVAGVVT VRQRPGSAKG VVFLTIEDET GIANIVVWPK IMKAFRREVM GARLIHIEGR
LQRSPEGVVH LVASKLQDRS AALIEMSGRE AQRLVAPSQM AHHPRNVKIM PNSRDFH
|
|---|
| |