Gene Oant_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOant_0078 
Symbol 
ID5378571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOchrobactrum anthropi ATCC 49188 
KingdomBacteria 
Replicon accessionNC_009667 
Strand+ 
Start bp84576 
End bp85232 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content58% 
IMG OID640832727 
ProductHly-III family protein 
Protein accessionYP_001368638 
Protein GI153007423 
COG category[R] General function prediction only 
COG ID[COG1272] Predicted membrane protein, hemolysin III homolog 
TIGRFAM ID[TIGR01065] channel protein, hemolysin III family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTAA GACTGCCTCA TCCAGTCAAA TGGAAATATG ACCGGGCCGA ATTGTGGGCC 
GATGGCGTCA TCCATGTTCT GGGTGTCGGG CTGGCGCTTG CGGGCGCCAT TGCCATGCTG 
ATCTATTTCC TGCCGAACAT GCCTGCGGCG ACCTCGATTT CGTCGGGGGT CTATCTCGCG 
AGCCTTCTGG CGGCGCTCGG CATTTCGGCC GTCTACAATA TCTGGCCGGT TTCCCCGACC 
AAATGGTTCC TGCGCCGTTT CGACCATTCG GCGATCTATC TGCTGATCGC CGGAACCTAC 
ACGCCTTTTG CCATGCATAT GGGCGACCGC GCTCTGCCGC TGCTTCTCTT CGTCTGGAGC 
GTGGCTTTCG TCGGCATCAT GCTGAAACTG TTCATGCCGG GACGTTTCGA CCGGCTGTCG 
ATCCTGCTTT ATCTGGCGCT CGGCTGGAGC GGCGTCATGG TCTACGACAC CATGGTGCAA 
TCGCTGCCGC CAGCCGTTTT CTGGCTGATT GCAGCCGGTG GCATGGTCTA TTCGTTGGGG 
GTGATCTTCC ATGTCTGGGA GCGCCTGCGG TTTCAGAATG CCATCTGGCA CGGCTTTGTC 
GTGGTGGGCG CGGCACTGCA TTATTGTGCT GTGTTTTTCG TTGGCGCATG GAACTGA
 
Protein sequence
MNVRLPHPVK WKYDRAELWA DGVIHVLGVG LALAGAIAML IYFLPNMPAA TSISSGVYLA 
SLLAALGISA VYNIWPVSPT KWFLRRFDHS AIYLLIAGTY TPFAMHMGDR ALPLLLFVWS 
VAFVGIMLKL FMPGRFDRLS ILLYLALGWS GVMVYDTMVQ SLPPAVFWLI AAGGMVYSLG 
VIFHVWERLR FQNAIWHGFV VVGAALHYCA VFFVGAWN