Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_0060 |
Symbol | |
ID | 5378817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009667 |
Strand | - |
Start bp | 68846 |
End bp | 70417 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640832709 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_001368620 |
Protein GI | 153007405 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTGCTC CATACAATCT CAAGGACGAC AAGGTCGTCG TTATCATCGG CTCGGGCGCT GGCGGCGGCA CGCTCGGCAA CGAACTGGCC CAGAAAGGCA TCGACGTCGT CATTCTCGAA GCCGGAAAAC GCCACGAGTT CGAAGATTTT ATCAATGATG AATGGGATAG TTTTGCCCAG CTCGCCTGGC TCGACAAGCG CACGACATCG GGCAGCTGGC GCGTGGCGAA CGATTTCCCG AACCTGCCCG CATGGATCGT GAAGGCTGTC GGCGGCACCA CCACCCACTG GGCTGGTGCA TCCTTGCGTT TTCAGGATTA CGAGTTCGAG ACCCTGACCC ATTACGGCAA GATCGAAGGG GCAAATCTGC TCGACTGGCC GATCACGCTG GCCGATCTGG AGCCTTACTA CGCCAAGGCC GAGGACAAGA TGGGGGTCAC CCGCACCAAC GGCATTGAGG GTCTGCCCGG CAACAATAAT TTCAAGGTTA TGAAAGCCGG TGCCGACAAG CTCGGCTACA AGGAATGCCA TACGGGTCGC ATGGCTATCA ATTCCGCCCC GCGCGACGAC CGCATGGCCT GCCAGCAGAC CGGCTTCTGC TTTCAGGGCT GCAAATGGGG CGCAAAATGG TCGACGCTCT ATACGGAAAT TCCCAAGGGC GAGGAAACCG GCAGGCTGGA AGTTCGCCCG GAATGCACGG CGCTCAAGAT CGAGCACAAT GCGGCAGGCA AGGTGACGGG CGTGCTCTAT GCCGACAAGG ATGGCAAGCA GCACTTGCAG AAGGCGCGCG TCGTCTGCGT GGCAGGCAAT TCGATTGAAA GCCCGCGCCT TCTGCTCAAT TCGGCTTCGT CGAAATTCCC GGACGGCCTC GCCAATTCGT CAGGACAGGT CGGGCGCAAC TATATGCGCC ACACGACCGG TTCGGTCTAT GCCTCGTTTG AAAAGCCGGT TCACATGTAT CGCGGCACCA CCATGGCAGG CATCATCCGC GATGAGGCTG CGCATAATCC GAAACGAGGC TTCGTCGGCG GCTATGAGAT GGAAACCGTT TCGCTTGGCC TGCCTTTCAT GGCTGCCTTC CTCAATCCGG GCGGTTGGGG GCGCAGCTTC ACCTCGGCAC TCGACGATTA TGTCAACATG GCCGGTCTCT GGATCGTCGG CGAAGACATG CCGCAGGAGA AAAACCGCAT CACGCTGAGC AAGGACGTGA AGGACGAACA CGGCTTGCCG GTTCCCGACG TCTATTACGA CGATCACCCG AACGATATCG CCATGCGCGA TCATGCCTAT GCGCAGGGCA AGGCGCTTTA TGAGGCCGTT GGTGCCGTCC GTACCTTCCC GACCCCACCC TATCCGTCAA CGCATAATCT GGGCACCAAC CGGATGAGCG AAAAGCCGCA GGATGGCGTC GTGAACAAGC ACGGACAGAC GCATGACATC AAGAATCTGT TCGTTTCCGA TGGCAGCCAG TTCACAACCG GCGGCGCGGA AAACCCGACC CTGACCATCG TAGCTCTCGC TATCCGTCAG GCTGATTATA TCGCGGAACA GATGAAGAAG CGGGCGATCT GA
|
Protein sequence | MAAPYNLKDD KVVVIIGSGA GGGTLGNELA QKGIDVVILE AGKRHEFEDF INDEWDSFAQ LAWLDKRTTS GSWRVANDFP NLPAWIVKAV GGTTTHWAGA SLRFQDYEFE TLTHYGKIEG ANLLDWPITL ADLEPYYAKA EDKMGVTRTN GIEGLPGNNN FKVMKAGADK LGYKECHTGR MAINSAPRDD RMACQQTGFC FQGCKWGAKW STLYTEIPKG EETGRLEVRP ECTALKIEHN AAGKVTGVLY ADKDGKQHLQ KARVVCVAGN SIESPRLLLN SASSKFPDGL ANSSGQVGRN YMRHTTGSVY ASFEKPVHMY RGTTMAGIIR DEAAHNPKRG FVGGYEMETV SLGLPFMAAF LNPGGWGRSF TSALDDYVNM AGLWIVGEDM PQEKNRITLS KDVKDEHGLP VPDVYYDDHP NDIAMRDHAY AQGKALYEAV GAVRTFPTPP YPSTHNLGTN RMSEKPQDGV VNKHGQTHDI KNLFVSDGSQ FTTGGAENPT LTIVALAIRQ ADYIAEQMKK RAI
|
| |