| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oant_0029 |
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| Symbol | rpsA |
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| ID | 5379281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ochrobactrum anthropi ATCC 49188 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009667 |
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| Strand | - |
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| Start bp | 29804 |
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| End bp | 31504 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640832677 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001368589 |
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| Protein GI | 153007374 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGAAT TCAATCCATC CCTCGCAGAC TTCGAGTCGC TGCTGGCGGA ATCCTTTGCA
ACGAACGACC TTGCTGAAGG TTATGTCGTC AAGGGCCGCA TCGTAGCCAT TGAAAAGGAC
ATGGCGATCA TCGACGCCGG TCTGAAGGTC GAAGGCCGCG TGCCGCTGAA GGAATTCGGC
GCAAAGGGCA AAGACGGCAC GCTGAAGCCG GGCGACGAAG TGGAAGTTTA CGTCGAGCGC
ATCGAAAACG CTCTGGGCGA AGCTGTCCTG TCGCGCGAAA AAGCACGCCG TGAAGAAAGC
TGGGTCAAGC TCGAGCAGAA GTTCGCCAAT GGCGAGCGCG TCGATGGCGT CATCTTCAAT
CAGGTCAAGG GTGGTTTCAC CGTCGACCTC GACGGCGCTG TTGCCTTCCT GCCGCGTTCG
CAGGTCGACA TTCGTCCGAT CCGCGACGTC ACCCCGCTCA TGCACGTCCC GCAACCGTTC
GAAATCCTCA AGATGGACAA GCGTCGCGGC AACATCGTTG TCTCGCGTCG TACCGTTCTT
GAAGAGAGCC GTGCGGAACA GCGTTCGGAA ATCGTTCAGA ACCTTGAAGA AGGTCAGGTC
GTTGAAGGCG TCGTCAAGAA CATCACCGAT TACGGTGCGT TCGTTGACCT CGGCGGCATC
GACGGTCTCC TGCACGTGAC CGACATGGCA TGGCGCCGCG TCAACCATCC GTCGGAAATC
CTCACCATCG GCCAGACGGT CAAGGTGCAG ATCATCCGCA TCAACCAGGA AACCCATCGT
ATCTCGCTCG GCATGAAGCA GCTCGAGAGC GATCCTTGGG ATGGCATCGG CGCGAAGTAC
CCGATCGGCA AAAAGATCAC CGGCACCGTC ACGAACATCA CCGACTACGG TGCGTTCGTT
GAAATCGAGC CGGGCATCGA AGGCCTCATC CACGTTTCCG AAATGTCGTG GACCAAGAAG
AATGTCCATC CGGGCAAGAT TCTTTCCACC ACGCAGGAAG TCGAAGTCGT TGTGCTCGAA
GTTGATCCGG TCAAGCGCCG TATCTCGCTG GGCCTCAAGC AGACCCTCGA CAATCCGTGG
ACGACCTTTG CCCAGAAGTA CCCTGTCGGT ACCGTTGTTG AAGGTGAAGT CAAGAACAAG
ACCGAATTCG GCCTGTTCAT TGGCCTCGAC GGCGACGTTG ACGGCATGGT TCACCTCTCC
GACCTCGACT GGAACCGTCC GGGCGAACAG GTCATCGAAG AGTACAACAA GGGTGAAGTC
GTCAAGGCTG TCGTTCTCGA CGTCGATATC GACAAGGAAC GCATCTCGCT CGGCATCAAG
CAGCTTTCCG GCGACAAGGT CGGCGAAGCA GCAGCTTCCG GCGAACTGCG CAAGAACGCC
GTTGTGACCT GCGAAGTGAC CGCCGTTACC GACGGTGGCC TCGAAGTCCG TCTCGTCGAC
CACGATCTCG AAAGCTTCAT CAAGCGTTCG GATCTGTCGC GTGACCGCGA CGAGCAGCGT
CCGGAACGCT TCACGGTCGG TCAGAAGCTT GACGCTCGCG TCATCGCTTT CGACAAGAAG
ACCCGCAAGC TGCAGGTCTC GATCAAGGCG CTCGAAATCG CTGAAGAAAA AGAAGCTGTC
GCTCAGTACG GTTCGTCCGA CTCCGGCGCT TCGCTCGGCG ACATCCTCGG TGCCGCTCTG
AAGAAGCAGG AAAAGAACTA A
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| Protein sequence | MSEFNPSLAD FESLLAESFA TNDLAEGYVV KGRIVAIEKD MAIIDAGLKV EGRVPLKEFG
AKGKDGTLKP GDEVEVYVER IENALGEAVL SREKARREES WVKLEQKFAN GERVDGVIFN
QVKGGFTVDL DGAVAFLPRS QVDIRPIRDV TPLMHVPQPF EILKMDKRRG NIVVSRRTVL
EESRAEQRSE IVQNLEEGQV VEGVVKNITD YGAFVDLGGI DGLLHVTDMA WRRVNHPSEI
LTIGQTVKVQ IIRINQETHR ISLGMKQLES DPWDGIGAKY PIGKKITGTV TNITDYGAFV
EIEPGIEGLI HVSEMSWTKK NVHPGKILST TQEVEVVVLE VDPVKRRISL GLKQTLDNPW
TTFAQKYPVG TVVEGEVKNK TEFGLFIGLD GDVDGMVHLS DLDWNRPGEQ VIEEYNKGEV
VKAVVLDVDI DKERISLGIK QLSGDKVGEA AASGELRKNA VVTCEVTAVT DGGLEVRLVD
HDLESFIKRS DLSRDRDEQR PERFTVGQKL DARVIAFDKK TRKLQVSIKA LEIAEEKEAV
AQYGSSDSGA SLGDILGAAL KKQEKN
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