Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_0004 |
Symbol | |
ID | 5380359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009667 |
Strand | + |
Start bp | 3169 |
End bp | 4326 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640832651 |
Product | DNA polymerase III subunit beta |
Protein accession | YP_001368564 |
Protein GI | 153007349 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.638398 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTTGT CCTGTCCCAG CGAGCGAGTG CGTTTGAACA TGCGTGTTAC CCTAGAGCGA TCGAACCTTC TCAAATCTCT CAACCACGTC CATCGCGTCG TGGAGCGTCG CAACACGATA CCGATTTTGT CGAACGTGCT TTTGCAGGCT GAGGGCGCAA GTCTCGCACT CAAGGCGACC GACCTTGATC TTGAGGTCAA CGAAGCGACA GCCGCCATGG TGGAACAGGC AGGCGCTACG ACGGTTCCGG CACATCTTCT CTATGACATC GTCCGCAAGC TGCCGGATGG CGCTGAAGTC ATGCTGTCGA CCAATCCGGA TGGTGGTTCC ATTTCGGTCA TTTCCGGCAA GTCGTCTTTC CGCCTCCAGT GCCTGCCGCA GTCCGATTTC CCGGAACTGA CCGCTGGGGC ATTTACCCAT TCCTTCCGGA TCGAGGCGCA GGCTCTGAAG CGTCTCATTG ACCGCACGCA GTTTGCGATT TCGACGGAAG AAACCCGCTA TTACCTCAAT GGCATTTTCT TTCACGCCAT CGAAAGCGAG GGTGCCCTGA AGCTGCGCGC TGTCGCGACC GACGGTCACC GTCTGGCGCG CGCCGAGCTG GAAGCACCGT CCGGCACGGA AGGCATGCCG GGCATCATCA TCCCGCGCAA AACGGTTGCC GAACTGCAGA AGCTGGTCGA TGTGCCGGAT GTGGTCGTTA CTGTTGAACT GTCGGACGCC AAGATTCGCT TCACGGTTGG ATCGGTGGTC CTCACCTCGA AGCTGATCGA CGGAACCTTC CCGGATTACC AGCGCGTGAT TCCGTCTGGC AACGACAAGA AGCTCACCAT CGGACGCCAG GAATTTGCGG CCTCCGTGGA TCGTGTCTCG ACCATTTCGA GCGAACGTGG CCGCGCGGTG AAGCTTTCAA TCGCCGATGG CCAACTGACG CTCACCGTCA ACAATCCCGA TTCCGGCAGT GCAACTGACG AGCTTGCGGC GGACTATGAC GCCGATCCGC TCGATATCGG GTTCAACTCG AAATACCTGC TCGACATTAC GAGCCAGCTT TCGGGTTCGG ACGCGGTCTT CATGCTGGCC GATGCAGGTT CGCCGACGCT GGTGCGCGAC ACCGGCGATG AAGACGTATT GTACGTCCTG ATGCCTATGC GTGTTTAA
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Protein sequence | MQLSCPSERV RLNMRVTLER SNLLKSLNHV HRVVERRNTI PILSNVLLQA EGASLALKAT DLDLEVNEAT AAMVEQAGAT TVPAHLLYDI VRKLPDGAEV MLSTNPDGGS ISVISGKSSF RLQCLPQSDF PELTAGAFTH SFRIEAQALK RLIDRTQFAI STEETRYYLN GIFFHAIESE GALKLRAVAT DGHRLARAEL EAPSGTEGMP GIIIPRKTVA ELQKLVDVPD VVVTVELSDA KIRFTVGSVV LTSKLIDGTF PDYQRVIPSG NDKKLTIGRQ EFAASVDRVS TISSERGRAV KLSIADGQLT LTVNNPDSGS ATDELAADYD ADPLDIGFNS KYLLDITSQL SGSDAVFMLA DAGSPTLVRD TGDEDVLYVL MPMRV
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