| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4368 |
|---|
| Symbol | |
|---|
| ID | 5373737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 5217418 |
|---|
| End bp | 5217951 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640832634 |
|---|
| Product | F0F1 ATP synthase subunit delta |
|---|
| Protein accession | YP_001368545 |
|---|
| Protein GI | 153002864 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) |
|---|
| TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0261207 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAT TAACCACCAT CGCTCGCCCT TACGCAAAGG CAGCTTTTGA CTTTGCTATT
GAACAAGATG CAGTGGATTC ATGGGCAGAA ATGCTTACGT TTGCCGCATT GGTGAGTGAA
AACGAAACCA TGCAACCACT GTTAGCTGGC TCTTTAGCCA GCACTAAGCT CGCAGCACTC
TTTATTAGTG TGTGTGGTGA GCAAGTCAAT GTGCAAGGTC AGAACCTGAT AAAGGTAATG
GCTGAAAACG GTCGCTTAAA GGTACTACCT GCTGTATCTC AGTTATTTAC TGAATACCGT
AATGAGTGGG CAAAAGAAGT GGAAGCCGAT GTGGTTTCTG CAACTGAGCT GAGCTCTGAA
CAACAACAGC AGATTAGTAT TTCTTTAGAG AAACGTCTCG CACGCAAAGT TAAGCTGAAT
TGCAGCACTG ACGCCGCGCT CATCGCCGGT GTAATCATTA AGACAGGAGA CCTAGTCATC
GATGGCTCGG TCCGCGGTAA GTTATCGCGT CTGTCTGATA AGCTGCAGTC GTAA
|
|---|
| Protein sequence | MAELTTIARP YAKAAFDFAI EQDAVDSWAE MLTFAALVSE NETMQPLLAG SLASTKLAAL
FISVCGEQVN VQGQNLIKVM AENGRLKVLP AVSQLFTEYR NEWAKEVEAD VVSATELSSE
QQQQISISLE KRLARKVKLN CSTDAALIAG VIIKTGDLVI DGSVRGKLSR LSDKLQS
|
|---|
| |