Gene Shew185_4363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4363 
Symbol 
ID5373335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp5211488 
End bp5212870 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content47% 
IMG OID640832629 
ProductUDP-N-acetylglucosamine pyrophosphorylase 
Protein accessionYP_001368540 
Protein GI153002859 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 
TIGRFAM ID[TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0199038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTAA ATGTAGTGAT CTTAGCAGCT GGCAAGGGAA CACGGATGCG CTCTGATCTT 
CCTAAGGTAT TACATCCCAT CGCCCATAAG AGCATGGTGC AACATGTCAT CGATACCGCC
CACAAAGTGG GTAGTGACGC GATTCAGTTA GTCTACGGTT ATGGTGCTGA CAAGCTACAA
GCTAGCTTAG GTGAGCAACA ACTTAACTGG GTATTGCAAG CTGAGCAATT AGGCACGGGA
CATGCGGTTG CGCAAGCGAG CCCGCATATT GCTGACAATG ATACTGTGCT CATTCTTTAC
GGCGATGTGC CACTTATTCA ACAATCGACC CTTGAAGCCT TACTCGCTGC CCTTCCTGAA
AATGGCGTGG CCATTTTAAC GGTGAATTTA GCAGATCCTA TGGGTTATGG CCGTATTGTC
CGTACTCCTT GTAAAGGTCA AGAACAGGGG AAAGTCGTTG GTATTATTGA GCAGAAAGAT
GCTACAGCAG AGCAGCTACT GATCAACGAA ATCAATACCG GCATCATGGC CGTTCCAGGT
AAACAACTTA AAATTTGGTT AAGCCGTTTA TCCAACAACA ATGCCCAAGG CGAATATTAT
CTAACGGATA TTATTGCTAT GGCGCACGCT GATGGCGTTG CTATTGATAC TGCCCAGCCA
CAATCTGCGA TTGAAGTGGA AGGCGCCAAT AACCGCGTGC AACTGGCGCA ACTTGAACGC
GCTTACCAAG CCCGTGAAGC CGAAAAACTG ATGTTGGCGG GAGCGAACCT GCGCGACCCA
AGCCGTATCG ATATCCGTGG TGACGTCACT GTCGGTATGG ATGTGATGAT CGATATCAAC
GTGATATTCG AAGGCAAAGT GACCTTAGGT AATAATGTCA CTATTGGTGC AGGTGCGATT
TTAATCGATT GTGAGATTGC CGATAACGCT GAGATCAAAC CTTACTCTAT TATCGAAGGT
GCTAAGCTTG GCGTTGCTGC CAGTGCTGGT CCATTTGCCC GTTTGCGTCC CGGCGCAGAG
CTTAAGCAAG ATGCGCACAT AGGTAACTTT GTTGAAGTGA AAAAAGCGGT TATCGGCGTG
GGTTCTAAGG CTGGACACTT AGCCTATTTA GGCGATGCCG TTATAGGTGA TGGCGTTAAT
ATCGGCGCTG GCACTATTAC TTGTAATTAT GATGGCGCGA ATAAGCATCT TACCGTTATC
GAAGATAATG TTTTTGTTGG CTCGGACACT CAGCTGGTGG CACCTGTCAC TATTAGTAAA
GGCGCTACCT TAGGCGCTGG CTCAACCATT ACCCGTGATG TGGGTGAAAA TGAGTTAGTC
ATTACCCGTG TTAAACAAAA ACACCTGACG GGTTGGCAAC GTCCAGTCAA AATTAAAAAG
TAG
 
Protein sequence
MALNVVILAA GKGTRMRSDL PKVLHPIAHK SMVQHVIDTA HKVGSDAIQL VYGYGADKLQ 
ASLGEQQLNW VLQAEQLGTG HAVAQASPHI ADNDTVLILY GDVPLIQQST LEALLAALPE
NGVAILTVNL ADPMGYGRIV RTPCKGQEQG KVVGIIEQKD ATAEQLLINE INTGIMAVPG
KQLKIWLSRL SNNNAQGEYY LTDIIAMAHA DGVAIDTAQP QSAIEVEGAN NRVQLAQLER
AYQAREAEKL MLAGANLRDP SRIDIRGDVT VGMDVMIDIN VIFEGKVTLG NNVTIGAGAI
LIDCEIADNA EIKPYSIIEG AKLGVAASAG PFARLRPGAE LKQDAHIGNF VEVKKAVIGV
GSKAGHLAYL GDAVIGDGVN IGAGTITCNY DGANKHLTVI EDNVFVGSDT QLVAPVTISK
GATLGAGSTI TRDVGENELV ITRVKQKHLT GWQRPVKIKK