| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4353 |
|---|
| Symbol | |
|---|
| ID | 5369698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 5191510 |
|---|
| End bp | 5193321 |
|---|
| Gene Length | 1812 bp |
|---|
| Protein Length | 603 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640832616 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001368530 |
|---|
| Protein GI | 153002849 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATAAAC TCTTAACCCC CAGTTTATTG ATATGCGCAT TAAGCGCCTG CAGTACTACT
CAAACCACAA AAAATAGTCA AATCGCAGCG CCACAGACAA TATCGGCAGC ACAGTCGCAA
GTTGAGCCCA TAGCTCCCGC GCTGCAAGCG ATCATCGACC AAAGCTGGCA ATTACAGCTC
AGCGCGAGTC CTGAAATGGC TTACAGCATG GGCGATGCCA GTGCCGCAGG AAAGTTAGCG
GATCTCTCGC CAGCTGCGCT AGCTAAGCTC AATCAAGGCC AAATCGCAGT ATTAGCGCAG
CTCAAAGCAC TCGACCGCAG CAGTTTGAGT AAAGAAGATA AGATTAACGC TCAAATACTG
GAAGATCAGA TCCAAAACGA TGTCGACCTA TATCGCTTTA AAGATTATTA CTTGCCCATT
ACCGCGGAAA GCGGCTTCCA CGCTTATATC ACCTCAATCG CACAGGGAAG ATTCAACACC
CTTGAGGATT ACCGCAACTA TATTGCCAAA CTCAATGCAC TCCCGACCTA TTTCGCCCAG
CAAACTCACT GGCTAAAACA AGGATTGGCC GAGGGAATAA CGCCACCTAA AGTGACACTC
AATGGCTTTG AAGACAGTAT CAGTGCTTAT ATCGTTCCAG TGGAAAAGAG CGGTTATTTC
AACCCCTTTA CTCAATACCC CAGCTATTTC ACTGAAGCAC AAAAAACTCA GCTGACTCAA
GAAGGTCGCG CTTTAGTCGA GCAAAAAGTC TTGCCGCTGT ACCAAAACTT CTATGATTTT
ATGACCAAAG AGTACATTCC CAATGCACGG GAAAATATCG CGGCCAGTAG CTTACCTAAC
GGTGCTGAGT TTTATGAGAA TCGAGTACGT TACTATACGA CCTTGAATAT GACGTCGGCA
GAAGTGCATG AACTGGGCTT AAAAGAAGTA AAGCGTATCC GCCAAGAGAT GGAGCAAATC
ATCAAGTCCG TTGGCTTTAA AGGTAGCTTT GCCGACTTTT TACATTTCCT GCGGACCGAT
CCCCAGTTCT ACACCACCAG TGCCGATCAG TTACTCAAAG AAGCGGCATT TATTGCCAAA
AAAGCCGATG CCATGCTGCC TAAGTACTTC GGCAAACTTC CCCGTAAACC CTATGGTATA
GCGCCAGTGC CCGCCGAAAT TGCGCCGAAA TACACCACGG GACGATATTC AGGATCGAAC
AGCGATGACG AACCCGGTTA CTACTGGGTC AACACTTATG CATTGGACAA ACGCCCACTC
TACGAGTTAG AAGCTTTAAC TTTGCACGAA GCCGTACCCG GTCATCATCT GCAAATATCA
CTCAACTCTG AGCTAACGTC ACTCCCTGAC TTCCGTCGTT ATGGCTATAT CTCTGCCTTC
GGTGAAGGCT GGGGTCTGTA TTGCGAATAC TTAGGTTTGG AGGCTGGCTT CTACCAAGAT
CCCTACAGTA ACTTTGGCCG CTTAACCTAT GAAATGTGGC GAGCGGCGCG TTTAGTAGTA
GACACAGGCA TGCATGCTCA AGGGTGGAGT CGTCAACAAG CCATCGACTT TATGGCCAGC
AATACCGCGC TATCACTGCA CAATGTCACG ACCGAAATTG ACCGTTATAT TTCGTGGCCA
GGACAAGCTT TGTCCTACAA GATTGGCGAG TTAACGATCA AGCGGTTACG TGCGAAAGCA
GAACAGGAAC TCGGCGATCA GTTTGATATT CGCGCCTTCC ACGACGCTGT GCTCGAAAAT
GGCTCAGTAC CTATGTCGAT CCTCGAACAG CAAATCAATG ATTTTATTGA AGCTAAAAAG
GCGACACGCT AA
|
|---|
| Protein sequence | MHKLLTPSLL ICALSACSTT QTTKNSQIAA PQTISAAQSQ VEPIAPALQA IIDQSWQLQL
SASPEMAYSM GDASAAGKLA DLSPAALAKL NQGQIAVLAQ LKALDRSSLS KEDKINAQIL
EDQIQNDVDL YRFKDYYLPI TAESGFHAYI TSIAQGRFNT LEDYRNYIAK LNALPTYFAQ
QTHWLKQGLA EGITPPKVTL NGFEDSISAY IVPVEKSGYF NPFTQYPSYF TEAQKTQLTQ
EGRALVEQKV LPLYQNFYDF MTKEYIPNAR ENIAASSLPN GAEFYENRVR YYTTLNMTSA
EVHELGLKEV KRIRQEMEQI IKSVGFKGSF ADFLHFLRTD PQFYTTSADQ LLKEAAFIAK
KADAMLPKYF GKLPRKPYGI APVPAEIAPK YTTGRYSGSN SDDEPGYYWV NTYALDKRPL
YELEALTLHE AVPGHHLQIS LNSELTSLPD FRRYGYISAF GEGWGLYCEY LGLEAGFYQD
PYSNFGRLTY EMWRAARLVV DTGMHAQGWS RQQAIDFMAS NTALSLHNVT TEIDRYISWP
GQALSYKIGE LTIKRLRAKA EQELGDQFDI RAFHDAVLEN GSVPMSILEQ QINDFIEAKK
ATR
|
|---|
| |