| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4349 |
|---|
| Symbol | |
|---|
| ID | 5369901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 5187470 |
|---|
| End bp | 5188030 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640832612 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001368526 |
|---|
| Protein GI | 153002845 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3078] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0237894 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCGTA GCAAGAAAAC ACGCAAGGGC GGCGAGAACA GCCCTAAGTT ACAGCCAAGA
GTGAAGAAGC AAGATCGCGC TGTAGCGACT GGCAAACGTA AAGATTCTGG CAATAAATCA
GGCAGTCGTC ATAACGAAAG CTTAATTTTA GCGCAAGCGC CGCAACAGCA GGCAGCGAAG
AAAAAAGACC CGCGTCATGG CAGCAAGAAG CCTATTGCTT TAGCGATTCC AGCGGCAGTG
GTTACAGATA AAGCCGCTCA GCCAAAAGTG AAACAAGCGA AGCTGACTGA CGAGCAAAAA
CTGCTGAAAT TGGAAGAAGA TCCAAGACTA AATCAGCTAT TAGATATGCT TGAAGAAGGC
CGTGATCTCA ACGATGTTGA CCAAAAATGG TTAGATCAAC AGCTGAATAA GATTGAAGCT
CTGATGGTTA AACTGGGCAT TAGCGATGAT ATGGATGATG ATGCACCTTC ATCACCAGCT
AAGTCTTTGT CTGACGATGA GTTGTTCGAC AAGTTCGAAT CAGGCGCTGA CTTACTGAAA
GATTATCAAG ACAAGTTCTA A
|
|---|
| Protein sequence | MSRSKKTRKG GENSPKLQPR VKKQDRAVAT GKRKDSGNKS GSRHNESLIL AQAPQQQAAK
KKDPRHGSKK PIALAIPAAV VTDKAAQPKV KQAKLTDEQK LLKLEEDPRL NQLLDMLEEG
RDLNDVDQKW LDQQLNKIEA LMVKLGISDD MDDDAPSSPA KSLSDDELFD KFESGADLLK
DYQDKF
|
|---|
| |