| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4325 |
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| Symbol | |
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| ID | 5370400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 5158676 |
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| End bp | 5160400 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640832588 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001368502 |
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| Protein GI | 153002821 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGCTC TTAGTTGCCG TTTCAATAGT CAGGATTACT ACCAAGTACT CTGGCCTTTG
CTCTTGATAA GCTTGCTGAT TTTGCTGGTG GGAGTGGGTT TTCGATCCCC TTGGCCTGCA
GATGAGCCGC GGTTTGTGGA AGTCGCACGG GAAATGGTGT CTTCGGGGCA ATGGTTATTT
CCTACCCGTG GCGGCGAGTA CTACCCTGAT AAACCGCCGG TATTCATGTG GGCTATCGCG
CTATTTTACC AGTTGACGGG TTCCCTTAAG ATCGCTTTCC TCCTCCCTAA CGCCTTGTGC
GGCCTGCTGA CTGTGTTCCT GGTTTATGAT CTTGGCGCCA GATTGTGGAA TGTACGTGTC
GGCCGAAATG CCGCCCTGTT ACTGTTAATT GTGCCGCAGT TTTTAATGCA GGCTAAAAAT
GCCCAGATCG ATGCTATGGT GATGTGTTGG ATCACTGTGG GATGCTACGG CTTGATCCGC
CACTTTATGC TCGGTCCCCA TTGGCGTTGG TATTTTGTTG GCTGGGCATT TATGGGGCTA
GGGGTGACTA CTAAGGGCGT CGGCTTTTTG CCCTTATTAA TGCTGATCCC TATTGGTATT
TATGCCGTTA AAGACAAAAG CCGTTTTCAA GGTCGTTTAA CTTGGTTATG TCTTGCTGGG
CCTTTGGTTA TGCTTGCCGT GATTGCCTGC TGGTTGGTGC CCATGGTGCT GACAGTGCAA
GCCCATGGCA CGCCCGAACT TGTTGCTTAT CAAAACAACA TCTTGTTTAA GCAAACCGGT
GAGCGTTATG TCAACGCTTG GCATCATATT AAGCCTTGGT ATTTCTTTGT CTTAAGTGTC
ATTCCTTGGA TGTGGTTCCC TATTTCGCTG CTGGTGGTTG CTTACTGGAA ACAATGGGTG
CAGAAGGTGA AGGCCGATCC TACTATTGTA ATTCTGTTGA TTTGGGTGGC ACTTGTGGTG
CTGTTTTTCA GTATCAGTCC GGGTAAGCGT AATGTGTATA TTCTGCCGGC TTTGCCTATG
TTGGCGCTGG CGGCCTCAGC GGTGTTAACG GGTGTTGCGC CTAAAGTGTG GTTTGAAAAA
CTCGTCAGCG GATTACTGTG GTTTTTAGGT GGAGTGGTCT TGCTGGCGGG TGTGCTTGCG
CTTATTCATT ATCCTGCATT GGCTAAAGCG CTTGCCGACT ATACTGATGA TTTAACGGGT
ATTGGCTACC TATTTATCCT GCTTGGTCTG CTCTGGTTCC TGCTGCTTTG GCTCGCCCGT
AAACAGTTTG CTCTCGTTAA GATGGGGATT GTCTCTGCCT TAGGCTGGGT GCTGATCAGT
ACTTGGGGGT ATTCTATGCT CGATGAAATG CGCACTCCTA GAAGCTTGAT GCTGCATACA
GCGGAGGTGA TTGGCGAGGA CGCTGAGCTA GGCCTAGTGA ACTTTAAAGA GCAGTTTATT
TTGTTCTCTC CCATGAGTGT GACGCACTTT AGTTATCTTG CTTCGGTTGA GGAACAAGAG
CGTAATGCAT GGCAATGGAT GCAGGAAAAT AAACAACGTT ATTTATTAGT CCCGAGCGGG
GCTGAGCTGA GTTGTTTCGA TATCAAAGGC GGCAAGAGCA TGGGAATGGC CCATCGTGAT
GAGTGGATTT TGTTATCGGC AACTGAGCTA AAGTTGCAGT GCGAAAAGCC CAAACGTGAA
TATCGTTACT TTACTGATCA TCCGGGGCGC TGGTTAAAAG AGTAA
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| Protein sequence | MEALSCRFNS QDYYQVLWPL LLISLLILLV GVGFRSPWPA DEPRFVEVAR EMVSSGQWLF
PTRGGEYYPD KPPVFMWAIA LFYQLTGSLK IAFLLPNALC GLLTVFLVYD LGARLWNVRV
GRNAALLLLI VPQFLMQAKN AQIDAMVMCW ITVGCYGLIR HFMLGPHWRW YFVGWAFMGL
GVTTKGVGFL PLLMLIPIGI YAVKDKSRFQ GRLTWLCLAG PLVMLAVIAC WLVPMVLTVQ
AHGTPELVAY QNNILFKQTG ERYVNAWHHI KPWYFFVLSV IPWMWFPISL LVVAYWKQWV
QKVKADPTIV ILLIWVALVV LFFSISPGKR NVYILPALPM LALAASAVLT GVAPKVWFEK
LVSGLLWFLG GVVLLAGVLA LIHYPALAKA LADYTDDLTG IGYLFILLGL LWFLLLWLAR
KQFALVKMGI VSALGWVLIS TWGYSMLDEM RTPRSLMLHT AEVIGEDAEL GLVNFKEQFI
LFSPMSVTHF SYLASVEEQE RNAWQWMQEN KQRYLLVPSG AELSCFDIKG GKSMGMAHRD
EWILLSATEL KLQCEKPKRE YRYFTDHPGR WLKE
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