Gene Shew185_4317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4317 
Symbol 
ID5370450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp5151555 
End bp5152379 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content45% 
IMG OID640832580 
Productextracellular solute-binding protein 
Protein accessionYP_001368494 
Protein GI153002813 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2998] ABC-type tungstate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAACA TGAAATCTCA TATTAAGTCA CTACTGGGCC TGGTTGTTGC AGCCAGTATG 
TTCACCGTTT TACCCGCTCA CTCGACTGAA GTTATCAAGT TAGCCACGAC CACCAGCACT
GAAAACTCAG GCCTATTAAA AGAACTGTTA CCTAAGTTTG AAAGTGAATC TGGCTACAAG
GTTCAAGTTA TCGCCACTGG TACAGGCAAA GCCCTGAAAC TGGGTGAGCA AGGTGACGTG
GATTTAGTTA TGACTCATGC GCCAAGTGCC GAAGCTAAAT TCGTCGCCGA CGGTTTTGGT
GTTGAGCCCC GTGGCATCAT GGAAAATGAT TTCGTAGTAC TGGGCCCTAA AAATGACCCC
GCAAAAATCC GTGACAGCAA AAATGCCGAA GAAGCTTTCG CGAAAATTGC CAAATCAGGC
GTACCTTTTA TCTCTCGTGG TGACAATTCA GGCACTCACA TCAAAGAATT AGAAGTATGG
AAAGCGGCAA GTGTGACACC CGATTTCAAA GGTTACACTT CAGTAGGTCA AGGCATGGGC
AAAACCCTGC TAATGGCAAA CGAAATGCAA GGTTACACTC TGTCTGACCG TGGTACTTTT
GTAGCTTACA AAACTAAGCT AGATCTTGGT GTTGATTTCG ATGGCGGCAA AACCTTAGCC
AACCCATACC AAGTTATCCT GATCAACTCT GCTAAGTATC CAGATCTAAA CCACAAAGGC
GCTAAAGCGT TCAGTGACTG GTTGATCAGC AAAGAAGGTC AAAGCATGAT CAATAACTTC
AAAGTTGATG GCGAGCAATT GTTCAAGGCA ACTTATAGCG AATGA
 
Protein sequence
MLNMKSHIKS LLGLVVAASM FTVLPAHSTE VIKLATTTST ENSGLLKELL PKFESESGYK 
VQVIATGTGK ALKLGEQGDV DLVMTHAPSA EAKFVADGFG VEPRGIMEND FVVLGPKNDP
AKIRDSKNAE EAFAKIAKSG VPFISRGDNS GTHIKELEVW KAASVTPDFK GYTSVGQGMG
KTLLMANEMQ GYTLSDRGTF VAYKTKLDLG VDFDGGKTLA NPYQVILINS AKYPDLNHKG
AKAFSDWLIS KEGQSMINNF KVDGEQLFKA TYSE