Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4317 |
Symbol | |
ID | 5370450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 5151555 |
End bp | 5152379 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640832580 |
Product | extracellular solute-binding protein |
Protein accession | YP_001368494 |
Protein GI | 153002813 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2998] ABC-type tungstate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAAACA TGAAATCTCA TATTAAGTCA CTACTGGGCC TGGTTGTTGC AGCCAGTATG TTCACCGTTT TACCCGCTCA CTCGACTGAA GTTATCAAGT TAGCCACGAC CACCAGCACT GAAAACTCAG GCCTATTAAA AGAACTGTTA CCTAAGTTTG AAAGTGAATC TGGCTACAAG GTTCAAGTTA TCGCCACTGG TACAGGCAAA GCCCTGAAAC TGGGTGAGCA AGGTGACGTG GATTTAGTTA TGACTCATGC GCCAAGTGCC GAAGCTAAAT TCGTCGCCGA CGGTTTTGGT GTTGAGCCCC GTGGCATCAT GGAAAATGAT TTCGTAGTAC TGGGCCCTAA AAATGACCCC GCAAAAATCC GTGACAGCAA AAATGCCGAA GAAGCTTTCG CGAAAATTGC CAAATCAGGC GTACCTTTTA TCTCTCGTGG TGACAATTCA GGCACTCACA TCAAAGAATT AGAAGTATGG AAAGCGGCAA GTGTGACACC CGATTTCAAA GGTTACACTT CAGTAGGTCA AGGCATGGGC AAAACCCTGC TAATGGCAAA CGAAATGCAA GGTTACACTC TGTCTGACCG TGGTACTTTT GTAGCTTACA AAACTAAGCT AGATCTTGGT GTTGATTTCG ATGGCGGCAA AACCTTAGCC AACCCATACC AAGTTATCCT GATCAACTCT GCTAAGTATC CAGATCTAAA CCACAAAGGC GCTAAAGCGT TCAGTGACTG GTTGATCAGC AAAGAAGGTC AAAGCATGAT CAATAACTTC AAAGTTGATG GCGAGCAATT GTTCAAGGCA ACTTATAGCG AATGA
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Protein sequence | MLNMKSHIKS LLGLVVAASM FTVLPAHSTE VIKLATTTST ENSGLLKELL PKFESESGYK VQVIATGTGK ALKLGEQGDV DLVMTHAPSA EAKFVADGFG VEPRGIMEND FVVLGPKNDP AKIRDSKNAE EAFAKIAKSG VPFISRGDNS GTHIKELEVW KAASVTPDFK GYTSVGQGMG KTLLMANEMQ GYTLSDRGTF VAYKTKLDLG VDFDGGKTLA NPYQVILINS AKYPDLNHKG AKAFSDWLIS KEGQSMINNF KVDGEQLFKA TYSE
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