| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4315 |
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| Symbol | |
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| ID | 5370448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 5147733 |
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| End bp | 5149886 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640832578 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001368492 |
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| Protein GI | 153002811 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00270553 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCATTCT TCACTCACTT TTTTGGTGTC AGTTGGCAGC AAATGCAGGC CAAGGTACGC
TATCGCATAT TAATCCTGAC ATTACTGCCT ATTCTGCTGA CACTGGTGAG TTTAGTGTTT
ATCACTATTT ACTGGAATAT CAGCTACACA GGTAAGCAGC TGTTTATGAA AGTTAAAGCT
GACTTATCTG TTGCCGAAAA TACCTTGCAG CAAGTGCAAG TACGCCAAGA AAAGCAACTC
GAACGTGTGG TAACGTCTTG GACCTTTCAA AATGATTTTA GGCCACTTTT TAGTGGTAAA
GAATTAACTG GTGAAGTCAT CCACAGAGCC AGTCTCGACG CATTTCTCCT CGAACAGAAA
AAACAACTTA ACCTCGATTA TCTGCGTCTC GTCACTGTCG CCGAAGCGGC CGCTGACCCT
GATTTACGGC AGATCCTCCC AAAGATAAAC GGTTTATTAC CTTATTCCGG CCTGATGGTG
TTGCCGCCCG AACGTTTATC TCGCATCGAC CCAGAATTAG CGGTCACAGC GAGCATCCCG
ATAGTCGCGA CTTTGCGAGC GCAGAGCCCG ACGAAAACCG TTGAAGAACG CGGTTTATTG
AGCCGTAGTC TACTGCCCGT GCCTGATATG CAAGGTAAAG TGGCTTGGTA TCTGGATGGC
GGCATTCTGT TCAATCGTGA CATTCGGATT GTCGACCACA TTCGTGATCT GGTGTACGAC
AAGGGCACTT TGCCCGAGCG CTCCATCGGC ACAGTGACCA TCTTCTTGGA TAACATCCGT
ATTTCCACTA ACGTGCCACT GCACTTTTAT CCCACGGGCA ACGAGACGCA AGGTCGCGCG
CTGGGCAGTT TAGTGTCGGA GGAAGTGAAA GAAAAAGTGT TAACCCAAGG CGAGCAATGG
GTCGACCGCG CTTTTGTGTT TAACGATTGG TTTATATCCG CTTATGCTCC CTTGGAAGAT
ATTCGCGGCC AGCGTGTTGG CATGATCTAT ACGGGGTTTT CTGAGTCGCC TTTTATCCAT
AATTATTTAT TAAATATCAT AGAGCTAGGC ACGATTCTAA TGTTGGTTCT GTTGGTGTCA
GGTTTGCTGG TTTATCGCGG CGCCTATAGC TTGTTGCAGC CGATCGAGCG TATCCACCAT
GTTGTTCAAG CGGTGCAGTC GGGGCGCAAT ATTCGTATCG GCGCTTTAGG GTTAGATAGG
GATAACGAGT TATCGAACTT GGCCGAGCAG TTCGACAGTA TGCTCGATCT GCTGCAGCGC
CGAAATGCCC AGATCCAAGC GGCGGCAGAG CAGCTTGAGA TGAAGGTCGA AGAGCGTACC
CGCAGCTTGC AGGACAAAAC CTTAGAGTTG CAACGTAACG TGGCATTACT GAATGAAACG
CGTCAACAGC TCGTCACTAA CGAGAAGCTC ACCGCACTCG GTGAATTGAC CGCAGGTATT
GCCCATGAAA TCAATAATCC GACCGCCGTT ATCCTCGGCA ACATGGAGTT ACTGCGCTAC
GAGCTTGGCG ATAATGCTGA AGTGGTAAAA GAAGAAATTG ATCTCGTTAT TCAGCAGGTG
GGACGGATCA GCACCATTAT CCGTAGCCTG TTGCAGTACA GTCGTCCGGG CGAATTTAAC
GCCCCGTTAG AAATGCATCC GATTACCCCC ATTATTGAAG AAATGTTGGT GTTAGTGCGG
CATTCGATTC AGAAACAAGA AGTGGTATTG ATCACTGAGT TAAACGCCAG TTGTCCAGTG
CAGGTCAATC GACCGCAGTT ACTGCAAGTC TTGATTAATC TGGTAGTAAA CGCGGCGCAT
GCGATGGACG GTAAAGGACG TATCTGGGTG CGAACCTATG ATTGGGTACA GCAAGATATG
CCGATTGGCG TTAAAATCGA AGTGGAAGAT GAAGGTTCTG GGATAGCACC AGATCAGCTA
GGACGGATTT TCGACCCCTT TTACACCACG CGTAAGGATG GCACTGGTTT AGGGCTTTCG
CTCAGTTATG GCATTATTAA GCGGATTGGT GGCACGATAG AAGTGAGCTC AACCTTAGGT
AAAGGCACAT TATTTACCAT AGGCTTGTAC CATGAGGCGA AGGAAGATCA GCAAAACAAT
CCCTACGAGG GCTTACATAT TGCGGGCAAC TACAGCGACA TGTCTGCCGA TTAG
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| Protein sequence | MSFFTHFFGV SWQQMQAKVR YRILILTLLP ILLTLVSLVF ITIYWNISYT GKQLFMKVKA
DLSVAENTLQ QVQVRQEKQL ERVVTSWTFQ NDFRPLFSGK ELTGEVIHRA SLDAFLLEQK
KQLNLDYLRL VTVAEAAADP DLRQILPKIN GLLPYSGLMV LPPERLSRID PELAVTASIP
IVATLRAQSP TKTVEERGLL SRSLLPVPDM QGKVAWYLDG GILFNRDIRI VDHIRDLVYD
KGTLPERSIG TVTIFLDNIR ISTNVPLHFY PTGNETQGRA LGSLVSEEVK EKVLTQGEQW
VDRAFVFNDW FISAYAPLED IRGQRVGMIY TGFSESPFIH NYLLNIIELG TILMLVLLVS
GLLVYRGAYS LLQPIERIHH VVQAVQSGRN IRIGALGLDR DNELSNLAEQ FDSMLDLLQR
RNAQIQAAAE QLEMKVEERT RSLQDKTLEL QRNVALLNET RQQLVTNEKL TALGELTAGI
AHEINNPTAV ILGNMELLRY ELGDNAEVVK EEIDLVIQQV GRISTIIRSL LQYSRPGEFN
APLEMHPITP IIEEMLVLVR HSIQKQEVVL ITELNASCPV QVNRPQLLQV LINLVVNAAH
AMDGKGRIWV RTYDWVQQDM PIGVKIEVED EGSGIAPDQL GRIFDPFYTT RKDGTGLGLS
LSYGIIKRIG GTIEVSSTLG KGTLFTIGLY HEAKEDQQNN PYEGLHIAGN YSDMSAD
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