Gene Shew185_4315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4315 
Symbol 
ID5370448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp5147733 
End bp5149886 
Gene Length2154 bp 
Protein Length717 aa 
Translation table11 
GC content48% 
IMG OID640832578 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001368492 
Protein GI153002811 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00270553 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCATTCT TCACTCACTT TTTTGGTGTC AGTTGGCAGC AAATGCAGGC CAAGGTACGC 
TATCGCATAT TAATCCTGAC ATTACTGCCT ATTCTGCTGA CACTGGTGAG TTTAGTGTTT
ATCACTATTT ACTGGAATAT CAGCTACACA GGTAAGCAGC TGTTTATGAA AGTTAAAGCT
GACTTATCTG TTGCCGAAAA TACCTTGCAG CAAGTGCAAG TACGCCAAGA AAAGCAACTC
GAACGTGTGG TAACGTCTTG GACCTTTCAA AATGATTTTA GGCCACTTTT TAGTGGTAAA
GAATTAACTG GTGAAGTCAT CCACAGAGCC AGTCTCGACG CATTTCTCCT CGAACAGAAA
AAACAACTTA ACCTCGATTA TCTGCGTCTC GTCACTGTCG CCGAAGCGGC CGCTGACCCT
GATTTACGGC AGATCCTCCC AAAGATAAAC GGTTTATTAC CTTATTCCGG CCTGATGGTG
TTGCCGCCCG AACGTTTATC TCGCATCGAC CCAGAATTAG CGGTCACAGC GAGCATCCCG
ATAGTCGCGA CTTTGCGAGC GCAGAGCCCG ACGAAAACCG TTGAAGAACG CGGTTTATTG
AGCCGTAGTC TACTGCCCGT GCCTGATATG CAAGGTAAAG TGGCTTGGTA TCTGGATGGC
GGCATTCTGT TCAATCGTGA CATTCGGATT GTCGACCACA TTCGTGATCT GGTGTACGAC
AAGGGCACTT TGCCCGAGCG CTCCATCGGC ACAGTGACCA TCTTCTTGGA TAACATCCGT
ATTTCCACTA ACGTGCCACT GCACTTTTAT CCCACGGGCA ACGAGACGCA AGGTCGCGCG
CTGGGCAGTT TAGTGTCGGA GGAAGTGAAA GAAAAAGTGT TAACCCAAGG CGAGCAATGG
GTCGACCGCG CTTTTGTGTT TAACGATTGG TTTATATCCG CTTATGCTCC CTTGGAAGAT
ATTCGCGGCC AGCGTGTTGG CATGATCTAT ACGGGGTTTT CTGAGTCGCC TTTTATCCAT
AATTATTTAT TAAATATCAT AGAGCTAGGC ACGATTCTAA TGTTGGTTCT GTTGGTGTCA
GGTTTGCTGG TTTATCGCGG CGCCTATAGC TTGTTGCAGC CGATCGAGCG TATCCACCAT
GTTGTTCAAG CGGTGCAGTC GGGGCGCAAT ATTCGTATCG GCGCTTTAGG GTTAGATAGG
GATAACGAGT TATCGAACTT GGCCGAGCAG TTCGACAGTA TGCTCGATCT GCTGCAGCGC
CGAAATGCCC AGATCCAAGC GGCGGCAGAG CAGCTTGAGA TGAAGGTCGA AGAGCGTACC
CGCAGCTTGC AGGACAAAAC CTTAGAGTTG CAACGTAACG TGGCATTACT GAATGAAACG
CGTCAACAGC TCGTCACTAA CGAGAAGCTC ACCGCACTCG GTGAATTGAC CGCAGGTATT
GCCCATGAAA TCAATAATCC GACCGCCGTT ATCCTCGGCA ACATGGAGTT ACTGCGCTAC
GAGCTTGGCG ATAATGCTGA AGTGGTAAAA GAAGAAATTG ATCTCGTTAT TCAGCAGGTG
GGACGGATCA GCACCATTAT CCGTAGCCTG TTGCAGTACA GTCGTCCGGG CGAATTTAAC
GCCCCGTTAG AAATGCATCC GATTACCCCC ATTATTGAAG AAATGTTGGT GTTAGTGCGG
CATTCGATTC AGAAACAAGA AGTGGTATTG ATCACTGAGT TAAACGCCAG TTGTCCAGTG
CAGGTCAATC GACCGCAGTT ACTGCAAGTC TTGATTAATC TGGTAGTAAA CGCGGCGCAT
GCGATGGACG GTAAAGGACG TATCTGGGTG CGAACCTATG ATTGGGTACA GCAAGATATG
CCGATTGGCG TTAAAATCGA AGTGGAAGAT GAAGGTTCTG GGATAGCACC AGATCAGCTA
GGACGGATTT TCGACCCCTT TTACACCACG CGTAAGGATG GCACTGGTTT AGGGCTTTCG
CTCAGTTATG GCATTATTAA GCGGATTGGT GGCACGATAG AAGTGAGCTC AACCTTAGGT
AAAGGCACAT TATTTACCAT AGGCTTGTAC CATGAGGCGA AGGAAGATCA GCAAAACAAT
CCCTACGAGG GCTTACATAT TGCGGGCAAC TACAGCGACA TGTCTGCCGA TTAG
 
Protein sequence
MSFFTHFFGV SWQQMQAKVR YRILILTLLP ILLTLVSLVF ITIYWNISYT GKQLFMKVKA 
DLSVAENTLQ QVQVRQEKQL ERVVTSWTFQ NDFRPLFSGK ELTGEVIHRA SLDAFLLEQK
KQLNLDYLRL VTVAEAAADP DLRQILPKIN GLLPYSGLMV LPPERLSRID PELAVTASIP
IVATLRAQSP TKTVEERGLL SRSLLPVPDM QGKVAWYLDG GILFNRDIRI VDHIRDLVYD
KGTLPERSIG TVTIFLDNIR ISTNVPLHFY PTGNETQGRA LGSLVSEEVK EKVLTQGEQW
VDRAFVFNDW FISAYAPLED IRGQRVGMIY TGFSESPFIH NYLLNIIELG TILMLVLLVS
GLLVYRGAYS LLQPIERIHH VVQAVQSGRN IRIGALGLDR DNELSNLAEQ FDSMLDLLQR
RNAQIQAAAE QLEMKVEERT RSLQDKTLEL QRNVALLNET RQQLVTNEKL TALGELTAGI
AHEINNPTAV ILGNMELLRY ELGDNAEVVK EEIDLVIQQV GRISTIIRSL LQYSRPGEFN
APLEMHPITP IIEEMLVLVR HSIQKQEVVL ITELNASCPV QVNRPQLLQV LINLVVNAAH
AMDGKGRIWV RTYDWVQQDM PIGVKIEVED EGSGIAPDQL GRIFDPFYTT RKDGTGLGLS
LSYGIIKRIG GTIEVSSTLG KGTLFTIGLY HEAKEDQQNN PYEGLHIAGN YSDMSAD