Gene Shew185_4313 details

Gene Information

• Locus tag: Shew185_4313
• ID: 5370517
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 5146165
• End bp: 5146824
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640832576
• Product: hypothetical protein
• Protein accession: YP_001368490
• Protein GI: 153002809
• COG category: [S] Function unknown
• COG ID: [COG1738] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR00697] conserved hypothetical integral membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0000298941
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAATGT TAACCACAGC GCAGCTTCGC CGCGCCTTAT TCCTATTAGT AGGATTCCAC 
ATACTGATTA TTTGCGTCAG CAACTACTTA GTACAATTGC CATTTCAGCT ATTTGGTTAC 
CACACAACCT GGGGCGCATT TAGCTTTCCA TTCGTGTACT TAGCCACAGA TCTCACTGTC 
CGTATTTTTG GCCAACAAGC CGCACGTAGC ATCATACTCA AAGCTATGGT TCCCGCTTTG 
ATGATTTCCT ACGTGATGGG TGTCGTGTTC CATCAAGGTA GCTTCCAAGG CGCTGACTCA 
CTTGCAGAGT GGAATACCTT TGTGTTCCGA ATCGCTTTTG CCAGCTTTGC TGCTTATTTG 
ATTGGTCAGT TAATGGATAT TAAGGTTTTT GCCCGTCTGC GAATGAGCCG CTCTTGGTGG 
GTCGCGCCTG CGGCATCGAC CTTAGTGGGT AATCTGGTCG ATACCTTAGT GTTTTTCAGT 
ATCGCCTTTT ACGCCTCTTC CGATAGCTTT ATGGCGGCCA ATTGGCCCGA AATCGCCACT 
GTCGATTACG GTTTTAAGCT GATCGTTAGC TTAGGTCTTT TCCTGCCTGC CTACGGAGTT 
CTGCTAAAAG TCTTACAAGA CAAGATTTTG CGCACCAATC CGCAAGAATC AATTTCCTGA 

 

Protein sequence

MLMLTTAQLR RALFLLVGFH ILIICVSNYL VQLPFQLFGY HTTWGAFSFP FVYLATDLTV 
RIFGQQAARS IILKAMVPAL MISYVMGVVF HQGSFQGADS LAEWNTFVFR IAFASFAAYL 
IGQLMDIKVF ARLRMSRSWW VAPAASTLVG NLVDTLVFFS IAFYASSDSF MAANWPEIAT 
VDYGFKLIVS LGLFLPAYGV LLKVLQDKIL RTNPQESIS