Gene Shew185_4309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4309 
Symbol 
ID5370581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp5139827 
End bp5141197 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content51% 
IMG OID640832572 
ProductABC transporter related 
Protein accessionYP_001368486 
Protein GI153002805 
COG category[P] Inorganic ion transport and metabolism
[V] Defense mechanisms 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component
[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTCC TAGCGCTCGA AGGCGTTAGC TTCAACTATG GCAGCCAGTT ACCGACTGTA 
TTGCAGGAGG TAAACTTGGC CATTGGCACC GGCCAATGCC ATTGCGTGAG CGGTCCTACG
GGCTCTGGGA AATCGAGTCT GCTAAACCTA CTGGCGGGCG TGTTAAATCG CCCGCATGAA
GGTGACATCT GGCGTTACCC ACAACTGGTT ACGGGTCTGG TGATGCAGGA CCCGCAAACT
CAGCTACTTC GGCAAACCGT TGGCGCCGAA GTGGCTTTCG CCTTAGAAAA TCTCGGCATT
CCCGCTGAGC AAATGCTACC TAAAGTGCAA TTGGCACTAC GGCGCGTGGG CTTGTATCTG
CGTCTCGATA CCCAAGTCAG CACGCTTTCC CTCGGTCAAA AATATCGTTT AATGATTGCC
GCCCAATTGG TGTGCGAGCC GCATTTACTG CTGCTCGATG AACCTTGGGC GCAACTCGAT
GATCACGGTG TGAGTGAGCT GCTGGTCGTA CTGCGCAATC TTATTCAAGA TGGCATGGCG
CTAGTGTTGG TTGAACATAA CGCCTCGGCC TTCGCTGAGA TTATTCAGAA TTACTGGCAG
TTAGAGGCGG GCAAGTTATC CGAAGGCATC TATACCGTGA ACGATGCGCC GCAAATTGAG
GCGCCTGCGT GGCGAAATCA GCCTAAGTTT GAGCATTTGG GCAAAGTCTT GGTCAGCGCC
GAAGCCTTTG ATTTTGGATT CGATGCTTGT CCCATGTTAT TTGCGTGTCC GCACGGATTC
CAACTGCAGG CGGGTGAGAT AGTGACCTTA GTGGGAGATA ACGGCTCTGG TAAAACGAGT
TTGTTGAAAA CCATAGCTGG CGTACTCAGT TCAAGGCAGC GTCTTCCGCT TAAAGTGCTC
GGGCGAAGAC CTAAGTTGGG GATTTATGGC GCTGAGCTGG GTCTGCTGAT GCAAAGGCCG
AGTCGACAAT TATTCGAGAC CAGCGTGCTG GCCGAAATGC AGTTTAGCCT TAGGCGTTTT
GAACTCCCCA AAGAACGCGC GGCGCAGATG TTGGATGAAT TGGATTTATT TAGCTTAGCT
CAGCTGTCGC CCCACAAATT ATCCTACGGC CAACAGCACT TGATTGCCTT AGCGTCACTC
GCCTGTTTAC GCCCTAAAGT GTTACTTTTG GACGATCCAT TGGCGGGGAT GGATAAGCAT
TACTACGGCA AAGTGTGGTA CTTGCTGAAG CGGTTAAGCT CTCAAGGTTG CGCTATTTTG
CTCAGCAGTC ACAGAAGCAT TGAACACAGC GCTGTATCAC GGCAATTGAG TTTGCGTAAT
GGTTTATTGG TGGAGGAATT GATTGAAACA GGAGAGCGTT ATGTGGGCTA G
 
Protein sequence
MKLLALEGVS FNYGSQLPTV LQEVNLAIGT GQCHCVSGPT GSGKSSLLNL LAGVLNRPHE 
GDIWRYPQLV TGLVMQDPQT QLLRQTVGAE VAFALENLGI PAEQMLPKVQ LALRRVGLYL
RLDTQVSTLS LGQKYRLMIA AQLVCEPHLL LLDEPWAQLD DHGVSELLVV LRNLIQDGMA
LVLVEHNASA FAEIIQNYWQ LEAGKLSEGI YTVNDAPQIE APAWRNQPKF EHLGKVLVSA
EAFDFGFDAC PMLFACPHGF QLQAGEIVTL VGDNGSGKTS LLKTIAGVLS SRQRLPLKVL
GRRPKLGIYG AELGLLMQRP SRQLFETSVL AEMQFSLRRF ELPKERAAQM LDELDLFSLA
QLSPHKLSYG QQHLIALASL ACLRPKVLLL DDPLAGMDKH YYGKVWYLLK RLSSQGCAIL
LSSHRSIEHS AVSRQLSLRN GLLVEELIET GERYVG