Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4309 |
Symbol | |
ID | 5370581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 5139827 |
End bp | 5141197 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640832572 |
Product | ABC transporter related |
Protein accession | YP_001368486 |
Protein GI | 153002805 |
COG category | [P] Inorganic ion transport and metabolism [V] Defense mechanisms |
COG ID | [COG1122] ABC-type cobalt transport system, ATPase component [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTCC TAGCGCTCGA AGGCGTTAGC TTCAACTATG GCAGCCAGTT ACCGACTGTA TTGCAGGAGG TAAACTTGGC CATTGGCACC GGCCAATGCC ATTGCGTGAG CGGTCCTACG GGCTCTGGGA AATCGAGTCT GCTAAACCTA CTGGCGGGCG TGTTAAATCG CCCGCATGAA GGTGACATCT GGCGTTACCC ACAACTGGTT ACGGGTCTGG TGATGCAGGA CCCGCAAACT CAGCTACTTC GGCAAACCGT TGGCGCCGAA GTGGCTTTCG CCTTAGAAAA TCTCGGCATT CCCGCTGAGC AAATGCTACC TAAAGTGCAA TTGGCACTAC GGCGCGTGGG CTTGTATCTG CGTCTCGATA CCCAAGTCAG CACGCTTTCC CTCGGTCAAA AATATCGTTT AATGATTGCC GCCCAATTGG TGTGCGAGCC GCATTTACTG CTGCTCGATG AACCTTGGGC GCAACTCGAT GATCACGGTG TGAGTGAGCT GCTGGTCGTA CTGCGCAATC TTATTCAAGA TGGCATGGCG CTAGTGTTGG TTGAACATAA CGCCTCGGCC TTCGCTGAGA TTATTCAGAA TTACTGGCAG TTAGAGGCGG GCAAGTTATC CGAAGGCATC TATACCGTGA ACGATGCGCC GCAAATTGAG GCGCCTGCGT GGCGAAATCA GCCTAAGTTT GAGCATTTGG GCAAAGTCTT GGTCAGCGCC GAAGCCTTTG ATTTTGGATT CGATGCTTGT CCCATGTTAT TTGCGTGTCC GCACGGATTC CAACTGCAGG CGGGTGAGAT AGTGACCTTA GTGGGAGATA ACGGCTCTGG TAAAACGAGT TTGTTGAAAA CCATAGCTGG CGTACTCAGT TCAAGGCAGC GTCTTCCGCT TAAAGTGCTC GGGCGAAGAC CTAAGTTGGG GATTTATGGC GCTGAGCTGG GTCTGCTGAT GCAAAGGCCG AGTCGACAAT TATTCGAGAC CAGCGTGCTG GCCGAAATGC AGTTTAGCCT TAGGCGTTTT GAACTCCCCA AAGAACGCGC GGCGCAGATG TTGGATGAAT TGGATTTATT TAGCTTAGCT CAGCTGTCGC CCCACAAATT ATCCTACGGC CAACAGCACT TGATTGCCTT AGCGTCACTC GCCTGTTTAC GCCCTAAAGT GTTACTTTTG GACGATCCAT TGGCGGGGAT GGATAAGCAT TACTACGGCA AAGTGTGGTA CTTGCTGAAG CGGTTAAGCT CTCAAGGTTG CGCTATTTTG CTCAGCAGTC ACAGAAGCAT TGAACACAGC GCTGTATCAC GGCAATTGAG TTTGCGTAAT GGTTTATTGG TGGAGGAATT GATTGAAACA GGAGAGCGTT ATGTGGGCTA G
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Protein sequence | MKLLALEGVS FNYGSQLPTV LQEVNLAIGT GQCHCVSGPT GSGKSSLLNL LAGVLNRPHE GDIWRYPQLV TGLVMQDPQT QLLRQTVGAE VAFALENLGI PAEQMLPKVQ LALRRVGLYL RLDTQVSTLS LGQKYRLMIA AQLVCEPHLL LLDEPWAQLD DHGVSELLVV LRNLIQDGMA LVLVEHNASA FAEIIQNYWQ LEAGKLSEGI YTVNDAPQIE APAWRNQPKF EHLGKVLVSA EAFDFGFDAC PMLFACPHGF QLQAGEIVTL VGDNGSGKTS LLKTIAGVLS SRQRLPLKVL GRRPKLGIYG AELGLLMQRP SRQLFETSVL AEMQFSLRRF ELPKERAAQM LDELDLFSLA QLSPHKLSYG QQHLIALASL ACLRPKVLLL DDPLAGMDKH YYGKVWYLLK RLSSQGCAIL LSSHRSIEHS AVSRQLSLRN GLLVEELIET GERYVG
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