Gene Shew185_4306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4306 
Symbol 
ID5370599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp5137855 
End bp5138592 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content52% 
IMG OID640832569 
Producthypothetical protein 
Protein accessionYP_001368483 
Protein GI153002802 
COG category[R] General function prediction only 
COG ID[COG1571] Predicted DNA-binding protein containing a Zn-ribbon domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT GGCTGATTTG TATCGACGAT ACCGATGATA TAGGCACTAA GGGCACGGGC 
GAAATTGCCG AGGAAATTGC CCATCTGCTG GCGAATATGT CGGGCGGCCA TGCTTCGTTT
GTGACGCGGC ATCAATTGTT TGTGCACCCC GATATTCCTT ATACCTCACA TAACAGTGCC
ATGTGTTTTG CGCTGCGCTC GCCACTGACG CAGGCCGAGA TCCATCAACA TGCCGTTGCG
CATTTGGTCG CGGAAGCGGC TCCCGCTGCC GATCCCGGCA TCGCCATACT CGATGTTGAC
TCTCGCTATG ATGTCGCAGC TTTAATGGAT TTTGGCCGCA GAGCTAAGGT TGAAGTGATT
ACGAAAGCGG CGGCCTATGA TTTGGCTGAA CAACTTAATA TTCAGCTGAC CGAACATGGC
GGCACAGGCC AAGGTGTGAT TGGTGCGTTA GCGGGATTAG GGCTACGTTT GATGGGCAGC
GACGGTCGGG TAAAAGGCCA GATTAAACTT GGCCAATTAG AGGATGTTTC ACTCGAACTC
AGCGTTGCCG ATATCCTCGA ACAAACCGGA CTTGATGCAG TGATGAGCAT GGACAAGTAT
CGACTTGCGC TTGATGAGCG AGTGCAGCTG AAGGGAAAAG TGAAAGCCGT ATACCTTGAT
CACCAGTTTG TATTGCTCGT TCATCAAGAG GCAGAGCAAT GGCGCAATGC TGGCAAGCAA
GCCCTGCAAG CCTACTAG
 
Protein sequence
MKNWLICIDD TDDIGTKGTG EIAEEIAHLL ANMSGGHASF VTRHQLFVHP DIPYTSHNSA 
MCFALRSPLT QAEIHQHAVA HLVAEAAPAA DPGIAILDVD SRYDVAALMD FGRRAKVEVI
TKAAAYDLAE QLNIQLTEHG GTGQGVIGAL AGLGLRLMGS DGRVKGQIKL GQLEDVSLEL
SVADILEQTG LDAVMSMDKY RLALDERVQL KGKVKAVYLD HQFVLLVHQE AEQWRNAGKQ
ALQAY