| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4288 |
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| Symbol | |
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| ID | 5371063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 5117753 |
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| End bp | 5118802 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640832551 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001368465 |
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| Protein GI | 153002784 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGGTATT TAATGATAGG TTTATACCTG CTGTGTTTTG CAGTCCACGC AAGCGCAGTA
CCTGTAACAG TCGCCTTGCC CCAAACGGGC AGCACCAATG AACTGTTGCC ACTCAGTGGC
TCCATTAAAT CCGCACGGGT GGCTCGCTTA TCGGCACGTA CCGATGGCCT AGTCGCCAAA
GTGCTGGTCG ATGCGGGCTC GCAAGTCCGC GCAGGCCAGC CTTTACTCGC ACTCGACGAT
ACCTTAGCCG TACATCAATT AGCACAGCGT CAAGCCGATG TAATAGCCGC TAAGACCATG
CTGACAGAAA AGCAGCGACT CCTCACCGAG GCGCAAACAC TCAGCGCTCA GCAGTTATTC
CCCGAAACGG AGCGCGCGAC TCGCCAAGCG GCGTTAACCG AGGCCGAAGC CAATCTGCAA
AGTTTAACGG CAGCACTCGC ACACCAAAAA GAGGTAGTCG CCCGTCACCA ACTGATGGCG
CCGTTTGCAG GGGTGATTTC CAGCAAACAA ACTGAAACCG GTGAATGGGT CAATGTCGGC
ACTGAAATCT TCACCTTAGT GTCCCAAGAG CAGCTCTGGC TCGACATTCA AGTGCCGCAG
GAAATGTTCC AAAGCGTAGC CACTGCGACT CACGTGGACA TTGCCGCCGA CATGCTGCCA
GAACAAGCGT TTATCGGCCA TGTGAGTGCC CTTGTCCCTG TGAGCGACCA CAATGCTCGC
AGCTTCTTGG TACGCTTGAC CATTCCCGAG GCAGATGGAC TTTTGATGCC CGGCACATCG
GCCACCGCCA CCTTCCACTT ACAGCGGGCG CAACACAGTG TTGTCGTACC GCAAGATGCC
CTAATCCGTC ACCCCGACGG CCAGTTCAGC GTCTTTACCG TGCAAAACAA CATAGCCCAA
CGCCATACCG TTCAAGTGGG CCATACGAGC GCCATCGGGA TTGAAATCCT CAGTCCATTA
CCCAAAGACG CGCCCGTGGT GATCCGCGGT AACGAGAGCT TACAAGACCA ACAGTCAGTC
TCTGTGCTCA ACTCTGTCAT AGGAGGTTAG
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| Protein sequence | MRYLMIGLYL LCFAVHASAV PVTVALPQTG STNELLPLSG SIKSARVARL SARTDGLVAK
VLVDAGSQVR AGQPLLALDD TLAVHQLAQR QADVIAAKTM LTEKQRLLTE AQTLSAQQLF
PETERATRQA ALTEAEANLQ SLTAALAHQK EVVARHQLMA PFAGVISSKQ TETGEWVNVG
TEIFTLVSQE QLWLDIQVPQ EMFQSVATAT HVDIAADMLP EQAFIGHVSA LVPVSDHNAR
SFLVRLTIPE ADGLLMPGTS ATATFHLQRA QHSVVVPQDA LIRHPDGQFS VFTVQNNIAQ
RHTVQVGHTS AIGIEILSPL PKDAPVVIRG NESLQDQQSV SVLNSVIGG
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