| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4286 |
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| Symbol | |
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| ID | 5371081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 5114857 |
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| End bp | 5117043 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640832549 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001368463 |
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| Protein GI | 153002782 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCCCC TATCTGTTTT AACGTCATGG CGCTCGCCAT TGATCCCTGT ACTTCTCAGC
ACACTCACTC TGACGGTTCA AGCCAATACG GACCCTAAGC AAGATGAGAA AGAAGATACA
GAACAGATAG AAAGATTAAA CGTAGTAGGA ACCTACACCC GAGCGGCAAT GAATAGCGCC
ACGGGTTTGT CTATGTCACT CAAAGAAACC CCGCAAAGCG TCACTTTGAT TACCGAAGAG
ATGATCAGTG ACAAAGGCTT GATCACTATG GAGTCAGTGT TAAACCACAC TCCGGGCGTC
ACTATGGTGG GTGATGCCTC TGAAAACAGT AAGATTTTCG TGCGCGGTTA TGCACTCGAC
AGCGGTGTGC AAATTGACGG CTTAATCACA ACCTCTTCAT CCAATGTTTA CAGCGGCTCA
ATTGATCAAG GTTTAGACCC TGTGATTGCC GAACGAGTTG AAGTGTTAAA AGGTGCGGCC
GGGATCTTAA GCGGCTTAGG TGAACCTTCT GCCACGGTTA ACTTTATTCG TAAACGCCCA
ACGGATGATA CCCGCGCCAC TGCAAGTGTC AGTTATGGCT CGTGGAATAC CTATAGATTA
GAGGCCGATG TTTCTGGCTG GCTCACGGAT TCAGGCAATG TGAAAGGTCG ATTCGTCAGT
GCGGTGAAGA AAGGCGATTC GTTTATCGAC CGCTATCAAC GCGATACCAC AGTGCTTTAT
GGCGTGGTTG AAACGAGTCT AGCCGTAGAT ACTAGCTTGT CACTGTTTGC GGACTATCAA
AAATCTCAAA CCGATGGCGT GTATAACTGG AACTCTAATC CTGCATTTTA TACCGATGGC
ACAGCTGTCG ATTTCGGCCG CAGTTATTCC AGCTCACAGG ACTGGACCCA TTGGGACGTG
ACCCAAAAAA GTCTCATGGC CGAGTTTAAA CATAGATTCG ATAACGACTG GTCACTCGTT
AGTGCCTACC GTATTGCTAA CGCCACCATA GATGCATTGG CCTTTTACCC TGGCGACAAC
ATAGTGAAAT CAACCGGCGA GTTTGTCGGC CCTTGGGGCG ATACCTATTC CGCCCAGCAT
GATAGAGAAT CCGATACCAA CAGCTTCAAC CTGTACGCCA CGGGTAACTT CGACTTACTC
GGCCGTGAGC ACAGTGCGGT GATCGGTTTT AACTATGGTG ACAACGAGTT TGACAACATC
AACACGAACT CCACACCCCA ACGTCGCTAT AACGTGGCAG ATCAAGGCAA TTATCCCAAG
CCTAATCTGC CTAATTCACC CACCAATGGC CAAAAAAATG AACAAAGCCA ATCGGGTGTT
TACGGCACAG TCCGTATCAA TGTATTGGAT TCACTGAAGT TAATGGTCGG CGGACGCGTG
AGTAACTGGT CCTACGAAAA ACATGATCTC GTGGGCAATA GCACAGATGC GACCATGGAA
AAAACCGGCA TTTTCATCCC CTACTATGGC CTAGTCTACG ATGTGACCGA ACAAATCTCT
GTCTATGCCA GCCGTACTGA AATCTTCAAA CCCGGCACGT ATTTTGGTGA AGATGGCCAA
CTGCTCGAAC CCGCAGAAGG CACCAACGTC GAAGGCGGCA TCAAGGTCGC ACTGTTCGAT
GACACCCTCA ATATGTCAGC GGCAATCTAC GAAACCAACA AAGACAACGA ACCCGAATAT
GCGGGTAAAG GTCAGCTACC TTCTGGGGAT TTTATCTACG AGAGTGTCGA TGGCATTACC
ACTAAGGGCT ACGAGCTAGA AATTGCCGGA CGGCTTACCG ATCTTTGGGA TATCAGTGGC
GGTTATACCC ATAACGACGC GGAAGATGAA GATGGCCTAC GCCGCCAAAC CTATCTCCCC
GAAGATATTT TCAAACTGAC CACTAAGTAT AACTTTGAAG ACATCCTCCC CGGTGTTACT
GCGGGCGCAA GCTGGCGCTG GCAGAGCAGC ACCTTCTATC AAGGCACTAT TTGGGGTGTC
GATGGCGCGC CGAATGTGGC TTACCGCCAA GCACAATCCG CCTACTCACT CGTTGACTTG
ATGTTTGGCT ACCAAATAAC ACCGTCGATT TCGATGCAAG TGAACATCAA CAATATCTTC
GACAAAAACT ATAACCGCTC ACTCTGGGGT TACGCAGACT TTGGCGAGCC ACGTAATGCC
ACGCTGTCAT TACGTTGGAC GCTGTAA
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| Protein sequence | MPPLSVLTSW RSPLIPVLLS TLTLTVQANT DPKQDEKEDT EQIERLNVVG TYTRAAMNSA
TGLSMSLKET PQSVTLITEE MISDKGLITM ESVLNHTPGV TMVGDASENS KIFVRGYALD
SGVQIDGLIT TSSSNVYSGS IDQGLDPVIA ERVEVLKGAA GILSGLGEPS ATVNFIRKRP
TDDTRATASV SYGSWNTYRL EADVSGWLTD SGNVKGRFVS AVKKGDSFID RYQRDTTVLY
GVVETSLAVD TSLSLFADYQ KSQTDGVYNW NSNPAFYTDG TAVDFGRSYS SSQDWTHWDV
TQKSLMAEFK HRFDNDWSLV SAYRIANATI DALAFYPGDN IVKSTGEFVG PWGDTYSAQH
DRESDTNSFN LYATGNFDLL GREHSAVIGF NYGDNEFDNI NTNSTPQRRY NVADQGNYPK
PNLPNSPTNG QKNEQSQSGV YGTVRINVLD SLKLMVGGRV SNWSYEKHDL VGNSTDATME
KTGIFIPYYG LVYDVTEQIS VYASRTEIFK PGTYFGEDGQ LLEPAEGTNV EGGIKVALFD
DTLNMSAAIY ETNKDNEPEY AGKGQLPSGD FIYESVDGIT TKGYELEIAG RLTDLWDISG
GYTHNDAEDE DGLRRQTYLP EDIFKLTTKY NFEDILPGVT AGASWRWQSS TFYQGTIWGV
DGAPNVAYRQ AQSAYSLVDL MFGYQITPSI SMQVNINNIF DKNYNRSLWG YADFGEPRNA
TLSLRWTL
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