Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4278 |
Symbol | |
ID | 5371666 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 5103289 |
End bp | 5104448 |
Gene Length | 1160 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640832541 |
Product | transposase IS3/IS911 family protein |
Protein accession | YP_001368455 |
Protein GI | 153002774 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTCTGA AGAAATCACA TAAGAGTTAT CCGCAGGCAT TTAAAGATGA AGCCGTCTTG ATGGTGCTAG AACAAGGTTA TAGCGTTGCC GATGCGGCAA AGTCTCTTGG AGTTAGCACG AGCCTGCTTT ACAACTGGAA GGAAAAACAC GAAGCCCTGA AACAAGGTAT CACCTTAGAA GAGTCTGAGC GTGATGAGCT AAAGAGATTA CGTAAAGAAA ACAAAGAATT ACGCATGGAG AAAGAAATTC TAAAAAAGGC AAGCGCCTTC TTTGCGAGAG AAATGAAGTA AGATTTCGTT TCATCAAACA GCAATCTAAC CTGTTTCCTA TAACACTGTT ATGCCGAGTA ATGAGTGTCA GTAAGTCAGG CTATTACGAT TGGCATAAAC GCCCTGCAAA CGTGATAAGC GTTGAAACAC TGAAGCTTTA TCGCCTTGTT CGACAGCTAT TTAAGCAAAG TCGAGGCAGC TTAGGGAATC GTGAAATGGT GAAGAAATTG CGCAAGGAAG GCTACCAGGT TGGTCGCTAT CTCGTTCGTA AAATTATGCA CCGCCTTCGA CTCAAAGCAA CCCAGCGACG CGCTTACAAG GTGACTACGC AGCGAAAACA CTCAGATGCT GTGGCTGATA ACCTGCTAAA CATGAACTTT AACCCCGTAT CGGCTAATGA GGTTTGGGCG GGTGACGTGA CCTATTTAAA GACAGGTGAA GGTTGGATGT ATTTGGCAGT GGTGATGGAT TTATATTCAC GCCGGATTGT GGGATGGCAC ATAGACAAAC GCATGACCAC AGATTTGATA TCTAAGGCAT TAATAAAAGC CTACAACCTG CGCCAACCGG CCAGAGGGTT GGTATTTCAC AGTGACCGAG GCTCGCAATA TACCAGTAAG CAGTTCGGCA GGTTGCTATC GAGCTATGGT ATCCGAGCCA GCATGGGTGA TGTGGGTGCG TGTTGGGATA ATGCCGTTGT TGAGCGATTC TTTGGTAGCT TGAAACACGA TTGGATTTTT AAAGTTGCTC AACCAACAAG GGAGTTTATG AAGCAAGATG TGACGGCTTA CATGAAATAT TACAACTTGG AGCGACTTCA TTCTGCTAAT GACGATCTGT CACCTGTAGA GTTTGAGAAT TCTCAAGTAA AAGTGTCCAG TTTGGGTTGA
|
Protein sequence | MSLKKSHKSY PQAFKDEAVL MVLEQGYSVA DAAKSLGVST SLLYNWKEKH EALKQGITLE ESERDELKRL RKENKELRME KEILKKGKRL LCERNEVRFR FIKQQSNLFP ITLLCRVMSV SKSGYYDWHK RPANVISVET LKLYRLVRQL FKQSRGSLGN REMVKKLRKE GYQVGRYLVR KIMHRLRLKA TQRRAYKVTT QRKHSDAVAD NLLNMNFNPV SANEVWAGDV TYLKTGEGWM YLAVVMDLYS RRIVGWHIDK RMTTDLISKA LIKAYNLRQP ARGLVFHSDR GSQYTSKQFG RLLSSYGIRA SMGDVGACWD NAVVERFFGS LKHDWIFKVA QPTREFMKQD VTAYMKYYNL ERLHSANDDL SPVEFENSQV KVSSLG
|
| |