Gene Shew185_4275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4275 
Symbol 
ID5371550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp5097767 
End bp5100247 
Gene Length2481 bp 
Protein Length826 aa 
Translation table11 
GC content38% 
IMG OID640832539 
Producthypothetical protein 
Protein accessionYP_001368453 
Protein GI153002772 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTAA ATAATGGAGC GAAGCCTCAT ATATTTCTTG GAAGAAATGG TACATCCTTA 
CCATATACTT ATCCTAAAAA GGTTATTATA AATAAAGATA TTCCAGAAAA ACACCGCCCA
ACTCATGGGG CCGCCATACA ATCCCAAATA ACTTTAGTTA AAAAATTTCA AGCACAGTTA
GAACAAAAAG CTGCACAGTA TGAGCTTGAA TCAAGACTTG GAATTCAAGT AGCATTCGAA
AGCTTTCCTG GCGTGGAGTT AGCAGTTGAA AGCCTAGCGG ATGCTGTCCA AGGAATTGAA
TTACTGAATG TTCGATATTC AGAAAATCAA ATTCTTGCCA CTATATTTGT TCCACAAGGC
AAACTTGTCT CTATTGAAAA AAAGCTCGAA GCTTACTTAA ATTTTAAAAA AGACAAAAAC
AAAAAACCAA TTGATAACAG AAAGTTATTC GATGCTATAA AGTCACTGAA AATAGCCGCT
ATTGAAGCCC TATGGACAGA CGATCCTGAT TTATTACCTG AAGACATTCA CAAAGTGTTT
TGGTGGGAAG TTTGGTTACC GGTCATGGAT GATAGACAGG CTTTAATTCA TGACTTTAAA
ATACTCTCAG CCGAATTAGA AATTCAGGTA TCAGATCACG TTCTTGAATT TCCTGAACGC
TCAGTTTTAT TAGCAAAAGC AAATAGAAAA CAATTCATTA ATAGTTCCCT TTTGCTAAGT
AAGATATCTG AATTACGCCT TGCAAAGGAA ACGGCCTCGT TCTTTGATGA GTTATCACCT
ATAGAACAGC AAGATTGGAG TAATGAGCTC TTATCTCGAA CAATGATTAA AGGCGAAAAT
CCACCATATT TATGTATTTT AGATACTGGC GTAAATATCT GCCACCCATT ATTACAACCA
TTTATTAATG AAGTAGATCA ATTCTCGGTT AATCCTGATT GGAGTCCAAG TGATGATAAT
GGACACGGTA CAGGAATGGC AGGTCTTGCT TTATGGTCTG ATTTAACTGA TGCACTTTCA
TCTACAGAGA CTATTAATAT TAGCCATAGG TTAGAGTCAG TAAAACTACT TCGCCATTCA
GGTGATAATG AAGGCAAACA CTATGGAATA ATTATGAGTG ATGCTATTTC TTTACCAGAA
ATATCGGATC ATAAGCGTAC TCGTGTTTTT GCAATGGCAT TATCATCCTC CGACAGTAGA
GATAGAGGGA GACCATCTGC TTGGTCTAGC ACAGTGGATG AGTTAGCTAC TGATTCGCTA
GGAGATAATC TTAATCCGAG ATTAATAACT ATTTCAGCAG GGAATACGGG GGATGATCTC
GTTGGGTTAC TGGAATATCC TGACTACAAT CAACTACAAG ATGTACATGA TCCAGGACAA
GCATGGAATG CATTAACTGT TGGTGCATAC ACACAGAAAA CTCATATCAC TGAAGAAGAT
ACTCAAGCAT ATTCATCACT AGCTCCGCAT GGTGGATTAA GTCCTTATAG TACAACATCA
GTATTATGGA ACAGAAATAC ACCAATTAAA CCCGAGGTTG TCTTTGAAGG TGGTAATGTT
GGTTATGACC AATTGAGCTG CTCTGGCTTT GCAAGTCTGA AATTATTAAC TACACATAAT
AAGATAACAG AAAGGCATTT TTCTACATTT GAAGCAACAA GTGCAGCAAC CGCACTTTCG
GGTAAATTTG CAGCTGAAAT TTATGCGATT TATCCCTCAA TATGGCCTGA AACGGTAAGA
GCGCTCATCG TCCATTCAGC TGAATGGACT GATGCAATGA AAAAACAATT CGTGCACGGC
ACAACGCCCC GCCAACAAGC AACACATTTA GTCCGTTGTG TTGGTTTTGG AGTTCCAAAT
TTAGATAAAG CTATAAAAAG TATGAATAAT TCTCTGGCTT TAATAGTGGA AGATGAATTA
CAACCATATG AAAAAAAGCA GGGTAAGCAA CCAAGCACAC GTGATATGCA TATACACGAT
ATCCCATGGC CTAAGGATAG CTTATTAAAA CTAGGGGAGG TGGATGTCGA AATGACGGTT
ACGCTCTCTT ATTTTATAGA ACCAAATCCT TCAAGCAGAA ATGTTTCCGG TAAATATAGT
TACCCTAGTC ATCAACTTAG ATTTGATGTG AAGCGGTCAA CTGAATCAAT TAAAGAATTC
CACGCTAGAT TAAGTCGTAA CGCCCAAGAT ACAGAAGAAG GTACTGCTAT TGCTCCTAGT
GATCCGAACT GGTTGCTGGG TGATTTTAGG CATAAAGGTT CCATTCATAA AGATGTCTGG
AAAGGAACTG CGGCTGATTT GGCTGCAAGA GGACAAATTG CGATTTACCC TGCTATGGGG
TGGTGGCGCA CTCGAACAAA ATTGCAAAAA TGGGATAAAA AAGCTCGCTA TTCCATGATT
ATTTCCATAG CGGTACCAGA AGTCGATATT GATGTAGATC TTTATACTGA CTGTTCTGGT
CTAATTCCAT CGGACACTTA A
 
Protein sequence
MSLNNGAKPH IFLGRNGTSL PYTYPKKVII NKDIPEKHRP THGAAIQSQI TLVKKFQAQL 
EQKAAQYELE SRLGIQVAFE SFPGVELAVE SLADAVQGIE LLNVRYSENQ ILATIFVPQG
KLVSIEKKLE AYLNFKKDKN KKPIDNRKLF DAIKSLKIAA IEALWTDDPD LLPEDIHKVF
WWEVWLPVMD DRQALIHDFK ILSAELEIQV SDHVLEFPER SVLLAKANRK QFINSSLLLS
KISELRLAKE TASFFDELSP IEQQDWSNEL LSRTMIKGEN PPYLCILDTG VNICHPLLQP
FINEVDQFSV NPDWSPSDDN GHGTGMAGLA LWSDLTDALS STETINISHR LESVKLLRHS
GDNEGKHYGI IMSDAISLPE ISDHKRTRVF AMALSSSDSR DRGRPSAWSS TVDELATDSL
GDNLNPRLIT ISAGNTGDDL VGLLEYPDYN QLQDVHDPGQ AWNALTVGAY TQKTHITEED
TQAYSSLAPH GGLSPYSTTS VLWNRNTPIK PEVVFEGGNV GYDQLSCSGF ASLKLLTTHN
KITERHFSTF EATSAATALS GKFAAEIYAI YPSIWPETVR ALIVHSAEWT DAMKKQFVHG
TTPRQQATHL VRCVGFGVPN LDKAIKSMNN SLALIVEDEL QPYEKKQGKQ PSTRDMHIHD
IPWPKDSLLK LGEVDVEMTV TLSYFIEPNP SSRNVSGKYS YPSHQLRFDV KRSTESIKEF
HARLSRNAQD TEEGTAIAPS DPNWLLGDFR HKGSIHKDVW KGTAADLAAR GQIAIYPAMG
WWRTRTKLQK WDKKARYSMI ISIAVPEVDI DVDLYTDCSG LIPSDT