| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4255 |
|---|
| Symbol | |
|---|
| ID | 5371431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 5071694 |
|---|
| End bp | 5072224 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640832520 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001368434 |
|---|
| Protein GI | 153002753 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTGT ATTTTCGTTT GTTTTGGTTG TTATTCTGGC GCACGCGCCA TTGTCGTAAG
ATCGATTTTC TAGGCACAAG CCGTATCACT TATCGTGCTT TACCGAGCGA TTGCGATATC
AATTTCCATC TAACTAATTC TCGCTATCCC GCGTTTATGG ATCTGGCGCG GACTTATATG
TTAGCCGAGA TGGGTCTACT AAAACGTTTC TTAAAGTTGA AGTGGATGCC GATAGTTAAC
GCCGCCGAGT TTACCTATAT TCGCGATATC AAGCCGCTAA AAACCTTTGA AATTGAAACC
AAAGTCGTCG GTTGGGATGA GAAGTATTTC TATATTGAAC AACGCTTTGT GAGCGAACGT
GGCCTGCATT GTATCGTACA TGTGCGCGGC GTGTTCGTGT GCAAAGGTAA GCAAGTGCCG
CTAGATGTGT TAGTGAAAGA GGCGGGTTAT ACCGATGCCG CACCTGAATT ACCGCCAGAA
GTCGTGAAGT GGAAAGCATT TTTGCAGTTG AAGAAAGAAC GCAATATGTG A
|
|---|
| Protein sequence | MNLYFRLFWL LFWRTRHCRK IDFLGTSRIT YRALPSDCDI NFHLTNSRYP AFMDLARTYM
LAEMGLLKRF LKLKWMPIVN AAEFTYIRDI KPLKTFEIET KVVGWDEKYF YIEQRFVSER
GLHCIVHVRG VFVCKGKQVP LDVLVKEAGY TDAAPELPPE VVKWKAFLQL KKERNM
|
|---|
| |