| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4244 |
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| Symbol | |
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| ID | 5372489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 5058627 |
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| End bp | 5059382 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640832509 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001368423 |
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| Protein GI | 153002742 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCCCA CTCGCATAGC ACCGACTCGC CCACCGATGG CTGCGGCCTT GTTATCGCCT
CGCAGCCTTG CCGTGTTGGG TCTGTGCTTA TGGCTGATAT CGAGTCTGAT GACGAGTATA
AAAGCGGAGG AGGCGAGCGT TAAAGCTAAG CCGCGTATCG TTGCCAGATA TTCAGAGAGC
GGCATAGTCA GCCGTGAAGG CTTAGAAAAA CTCAAGATTT ATCAATACCA ACAAGCCAAT
GGCGTCACAG TATTTACCGA CAAAGCCCCT GCCAATAACC CATATCAAAT TCTGTTGTAT
GACTGTTTCG CCTGTCGTCC CGACTCGACT ATAGATTGGA ATGGTATCCG TTTATTTACC
GCCAATTATG ATGCCCTGAT CACCCGTGCT GCCCATAAAC ATCAACTCGA CCCCGCCTTG
ATCCGCGCCG TGATCCACGC AGAATCAGCC TTTAATGCGC GTGCATTGTC GCGTACTGGC
GCTATGGGAT TGATGCAATT AATGCCTGAA ACGGCTAAAG AAATGGGTGT GGCAAACGCG
TTTTTACCCG AAGAAAATAT CTTAGGTGGC AGTAAGTATC TGGCGCAGAT GCTAAAACAG
TTTAACGGGG ATGTAGCCTT AGCCTGTGCG GCCTATAATG CGGGGCCGAC CACTGTGGTG
CAGTACAATG GCATTCCGCC CTATCCTGAA ACTCAAGCTT ATGTTGAGCG TGTGAAAATT
CTATTGAAGC GTTATCGCGA GCAGAAGGGC GTTTAG
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| Protein sequence | MLPTRIAPTR PPMAAALLSP RSLAVLGLCL WLISSLMTSI KAEEASVKAK PRIVARYSES
GIVSREGLEK LKIYQYQQAN GVTVFTDKAP ANNPYQILLY DCFACRPDST IDWNGIRLFT
ANYDALITRA AHKHQLDPAL IRAVIHAESA FNARALSRTG AMGLMQLMPE TAKEMGVANA
FLPEENILGG SKYLAQMLKQ FNGDVALACA AYNAGPTTVV QYNGIPPYPE TQAYVERVKI
LLKRYREQKG V
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