Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4242 |
Symbol | |
ID | 5372487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 5055360 |
End bp | 5057624 |
Gene Length | 2265 bp |
Protein Length | 754 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640832507 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_001368421 |
Protein GI | 153002740 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTTCAAT GGCTGAAAGG TTTTTTGTTT ATTAGGGATC GAGACTTTTT AAATCCTGAT AGAACAATAT TAAAAACCAG CTTATTGCGG ATCATTCTGC TCAGTGGCGC GATGTTGACC GCTAGCATAG TGCTGCATAG CTCTTTAATT GCGTATCAGT TAAACCTCGC TTTCATTATC AGCATTACGG TCAGTTTTTT AACCGTACTC TTCTTAACTT TATGGTTTAC CAGCAAATAT TTACTCGCCA GCTCAATCAG TCTGTTGGCT ATGGTCATTG CCGCCTGTAT TTCTATACTC TTGTTTGTCC CAGACTTTAA CTTATCCCAG GCAGGGATTA CCTTCTTATA TACCTTGCCC TTAATGGCGC TTTTTCTATT TGGCAGAAAA GTGGCCGTTA TTATGATGTT TTTTAATGTA TTGCCTTTTC TACTGCTACT GCGTAACCAA AATATTCCCC CGATTATTGA TATTGATATC AGTCTGCCTG CAACCCACGC TTATCTGAAT GGCTTGCTGT TTGTCTTTTT TAATATCTGT ATTCCCTTGT CGGCGATGCG CCTGCTAAAA ACCCAGAAAG TCCATGCGCA GCAAATGATC CAGCATCAAA ATGATCTGCA ACGTACCTTA GATCAATATG CTGAAATCTT TGAAAATAAT GGTACCGCTT CCTTCTTCTG TAATGAGGAC GGGGTGATCC TCAACCTAAA TAATGCGGCC AAAGAAATCG CCGGAGAGGT CACACTAAAC CGCACTCGCC TATGTGACAT TTTTGAACTT ACCGAAGATA CCAGCACAAA CTTACTGGCG GCCGCGTTTC CGACCCATTT AAAGAACAAC AACGACGCTA AATATCTGCT GCAGAAAGCC TCATTAGAGC ACCATGACAC TTTGTTGTTT CACTGCCACG ATGTCACAGA ACAGGCAAAC CATGCGATTG AACTAAGCCG ACTTAAAAAA CACCATATCA GCACACATTT CTATGATTTA GTGACCGGAT TACCCAACGA GAATCACTGG TATAACCCAG CCCCAAGCAC GATCCATTTG GATATGACAG TCGCCTTAGT CAAAATTGAT AATCTGAGTC AAATCAATGC CGCCTTCGGT ATCAGCGTCG GGGATGCCAT CCTAAAAGCC TTTGCGACCG AACTCAAAAA TCGCTTTGGT CATCACGCAA AAATATACCG GTTTAGGGGA GCCTCGTTTG CGCTTGAGTT TACCAGCCTG CCGCTGATCT CCCCCGAAAA CCTCGCGCTA CAATTACGCG AGCGTATTCC AACAAACCTG CAGCTTAAAC ATGAACAACA GATTGAATAT CATCTCGAGT GCCGAGTCGG TTGCAGTTCG GGTAATAAAG CTTCACCGCA GCAAGCCGCA GAGCAATGTT TAATTGCCAT TAAGCAAACC ACCCAAGCTA GCCCAGTCAT GGTGTATTAC ATTGGTTTGA TTAATAATCT TCTCGAAGCC TCATCGCAGA AAGCCAAAAT TCGCGATGCA TTGAAACACA ATCGTCTGGA AATGTGGCTA CAACCTAAAG TAAGGGCCGA TGGCCACATT ATTAGCTTTG AAGCACTGGC AAGAATGTTC GATGAAGACG GCACTATGAT TATGCCGAAC ACGTTTATCC CTATCATAGA GTCATCCCAA TTACAGGCGA TTTTTGCGAT AAAAGTCTTC AGGCAATTAC TACAACTTAT CCGTTCTTGG CCGAAAAATG TGCCTCTGGT CAGGATAGCC TTCAACTTAT CTGGGCAGGA TATATTGTCG GATCGCTTCT TTAAGGTGTT GATCCAAACC TATATGAATC ACCCCGAACT CATCCCATTA TTAGAAATTG AAATCACTGA AACCTCAGTA TTTTCAACCC ATAAAGAAAC GGGCCGACGC CTAAACACCT TGGCTCGTAT GGGAGTTTCT ATCGCCATTG ACGATTTTGG CACTGGCCAT GCGTCATTAA GCCAACTCAT CGATATCAGT GCCGACACGA TAAAAATCGA CCGCTGCTTT GTCAGTCAAA TGGGCATTAG TGAACGCCAT ACCCAAATTG TCAACGCCGC CATCCTGTTA GCCAAGAGCT TAAAACTCAA CGTCATAGCC GAAGGTATCG AAACCGAAGC CCAGTTATTG CAACTCACGG CGTTAGGATG TGAACAATTT CAAGGCTATC TATTCGGTAA ACCCGCCCCC GCGAATCTAT GGCTGAAAAC CTTTCAAATG CAAACGCCTA CACACTGGTT CGCCAATAAA AAGAGCGCCA ACTAA
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Protein sequence | MLQWLKGFLF IRDRDFLNPD RTILKTSLLR IILLSGAMLT ASIVLHSSLI AYQLNLAFII SITVSFLTVL FLTLWFTSKY LLASSISLLA MVIAACISIL LFVPDFNLSQ AGITFLYTLP LMALFLFGRK VAVIMMFFNV LPFLLLLRNQ NIPPIIDIDI SLPATHAYLN GLLFVFFNIC IPLSAMRLLK TQKVHAQQMI QHQNDLQRTL DQYAEIFENN GTASFFCNED GVILNLNNAA KEIAGEVTLN RTRLCDIFEL TEDTSTNLLA AAFPTHLKNN NDAKYLLQKA SLEHHDTLLF HCHDVTEQAN HAIELSRLKK HHISTHFYDL VTGLPNENHW YNPAPSTIHL DMTVALVKID NLSQINAAFG ISVGDAILKA FATELKNRFG HHAKIYRFRG ASFALEFTSL PLISPENLAL QLRERIPTNL QLKHEQQIEY HLECRVGCSS GNKASPQQAA EQCLIAIKQT TQASPVMVYY IGLINNLLEA SSQKAKIRDA LKHNRLEMWL QPKVRADGHI ISFEALARMF DEDGTMIMPN TFIPIIESSQ LQAIFAIKVF RQLLQLIRSW PKNVPLVRIA FNLSGQDILS DRFFKVLIQT YMNHPELIPL LEIEITETSV FSTHKETGRR LNTLARMGVS IAIDDFGTGH ASLSQLIDIS ADTIKIDRCF VSQMGISERH TQIVNAAILL AKSLKLNVIA EGIETEAQLL QLTALGCEQF QGYLFGKPAP ANLWLKTFQM QTPTHWFANK KSAN
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