Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4238 |
Symbol | |
ID | 5372846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 5052560 |
End bp | 5053030 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640832503 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_001368417 |
Protein GI | 153002736 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGCGC CCTTTAGTCA ACGACCAAGA CTCACGGCTC ATCCTTCAAA ACGTAAAGCT GTGATTAGCT TAACGCCACT CATTGATGTG GTGTTTATCC TATTGGTGTT TTTTATGCTG TCTTCCAGTT TTCTAGACTG GCGCACTGTG GCGCTCGATA CCAGCACGGC AGGTAGCCCC GCTCCCGCTG AGCAAGCGCC ATTTTTAGTA CAAATTAGCG CAGACCAACT GCAACTAAAC GGCGAAACGA TCACACTGGA AGCATTACAG CAAAAAGCAC AAGGGCGCCA GCCTGCAAGC CAAATGGTGA GCCTACAGCC GCAGGCGGAT ACTCCAGTAC AAAGGTTAGT ACAGGTATTA GATGCACTTA ATGCCGCAGG GATTGCGCCG CTAACACTGG TAGAAGACTC CAATTGGCAA CCCGCACCTG CGACGAAAGC GGACGGCAAT AATATGGAGA ACAGCCACTA A
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Protein sequence | MQAPFSQRPR LTAHPSKRKA VISLTPLIDV VFILLVFFML SSSFLDWRTV ALDTSTAGSP APAEQAPFLV QISADQLQLN GETITLEALQ QKAQGRQPAS QMVSLQPQAD TPVQRLVQVL DALNAAGIAP LTLVEDSNWQ PAPATKADGN NMENSH
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