Gene Shew185_4229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4229 
Symbol 
ID5372938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp5043140 
End bp5043787 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content45% 
IMG OID640832494 
Productchloramphenicol O-acetyltransferase 
Protein accessionYP_001368408 
Protein GI153002727 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGACA AGCATTGGTC AAAAGTTCAG TTATTGCATG AAGTGGTCAC CAATCCCAAT 
ATCATAGTCA AAGGTCAGAA TAGCTATTAC AGTGATTGCT GGGATGCTGG CTTTGAGGGA
TCAGCGGTGA GATATCTTCA TGGCGATGAA GTGAGCCGTG AGTGGGAGCC TAAGTGGCCT
ATCGATAAAC TTTATATCGG GAACTATGTT TGTATCGCCG CCGAAGTTGT GATCTTAATG
GGCGGAAATC ATACGCATAG AGCGGATTGG TTTTGTTTAT ATCCCTTTAT GGATTTCATC
GAGGAGGCCT ATGTAGGCAA AGGCGATACT CATATTGGTG ATGGGGCTTG GTTAGGTATG
AGATGTATGC TGATGCCTGG GGTGACGATA GGTGAAGGTG CGGTTGTTGC CGCAAATAGT
GTCGTCACTC AAAATATCGA ACCCTACAGT ATTGTGGCGG GATCACCTGC GAAATTAATC
AAGTATCGGT TTGATAAAGA CGTCATTACT GAGTTACTGG CGTTAAAAAT CTACGATTGG
CCTGCCGAAA AGTTTGAAAG CTTAAAGCGG TATTTGTGTT CGGCGGATTT TGACGCGCTC
AGCAAAGCGA TCACCCTCTA TGACCAATCC ATACATCAAA GCAAATAA
 
Protein sequence
MQDKHWSKVQ LLHEVVTNPN IIVKGQNSYY SDCWDAGFEG SAVRYLHGDE VSREWEPKWP 
IDKLYIGNYV CIAAEVVILM GGNHTHRADW FCLYPFMDFI EEAYVGKGDT HIGDGAWLGM
RCMLMPGVTI GEGAVVAANS VVTQNIEPYS IVAGSPAKLI KYRFDKDVIT ELLALKIYDW
PAEKFESLKR YLCSADFDAL SKAITLYDQS IHQSK