| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4228 |
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| Symbol | |
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| ID | 5372937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 5042173 |
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| End bp | 5043093 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640832493 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001368407 |
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| Protein GI | 153002726 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATAAATA ATCAATTTAT TGAGATACGC CATTTCGTCA CAGTTGCACA GCTCGGCAGT
TATACCTTAG CGGCGCAGGC GTTAGGCATG ACAGGTTCGG CGCTCAGTAA AAGCATAGTG
CGATTAGAAA CCCGCTTAGG CACTAAACTT TTACACCGCA CCACAAGGCG TGTGAGCTTA
ACCAATGATG GCGATTCGTA CCTCAAAGAC TGCCAAAATG CTATGGCAAT CCTAGACAAT
GCACAAAGCC GACTCGGCAG CGAACAGCAA ATTCCCTCAG GTCGAGTGCG AGTGGATTTA
CCCGTGACGT TTGGGCGGCG ATATATACTG CCGACCCTAT TAGCACTGTC GCAAAAATAT
CCCAAGCTCG AGTTATCTAT CACCTTCAAC GATAGAACGA CCGACTTATT CAGTGACGGC
ATTGATTTGG CAGTGCGTGT CGGACAACTC GGCGACACTG TGGATTTAGT CGCCCGTAGA
TTAGGGGAAC AACGCCGAGT GATCTGCGCT TCTCCTGCCT ATTTCGCTCG ACTTGGCACA
CCAAAAGACA AAGCAGATCT CAGCCAGCAC CAATGCATTG TTGGCTGGCC GCTTGGGCAG
CAACATCGCT GGTTACTTAA AAATGAGGAT GGGATCATCG AGGCCTATGA CATTCCAGTG
CGCCACGAAA TCGCTGATTG CGAAGCCATT TTAGCGGCCA CACTGGCGGG AGTGGGTTTA
GCGCAAGTGC CGATATGGTT GGTTGAGGAC TATCTTAAAA CCGGTGAACT TATCTCGGTA
CTGGACGAAC TCGCCAGTGA CGACACACCT ATCCACCTTA TTTGGCTTAA AACCCCTTAC
CTCCAACCCA AGCTACGGGT GATCATCGAA GAACTGGCCG AATTAGCCAA AACGCCAAAA
AGTAGATTTA AGGCAGAATA A
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| Protein sequence | MINNQFIEIR HFVTVAQLGS YTLAAQALGM TGSALSKSIV RLETRLGTKL LHRTTRRVSL
TNDGDSYLKD CQNAMAILDN AQSRLGSEQQ IPSGRVRVDL PVTFGRRYIL PTLLALSQKY
PKLELSITFN DRTTDLFSDG IDLAVRVGQL GDTVDLVARR LGEQRRVICA SPAYFARLGT
PKDKADLSQH QCIVGWPLGQ QHRWLLKNED GIIEAYDIPV RHEIADCEAI LAATLAGVGL
AQVPIWLVED YLKTGELISV LDELASDDTP IHLIWLKTPY LQPKLRVIIE ELAELAKTPK
SRFKAE
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