| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4225 |
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| Symbol | |
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| ID | 5369434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 5038223 |
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| End bp | 5040334 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640832490 |
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| Product | cytochrome c biogenesis protein transmembrane region |
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| Protein accession | YP_001368404 |
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| Protein GI | 153002723 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4232] Thiol:disulfide interchange protein
[COG4233] Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACAT TAAAATCCAT GTTAACCAGA TTCTGGATAC TCGCCTTGAT AGTGACGAGT
CCGTCGCTAT TGGCCGCATC GACGGGGTGG TTAGTTAACG ATAATCACCC GCCAGCCAAA
GTACGTTTTA TGCTGACGGG CGAAGTTGAT TCCGCAACGA ATACTTTGCC CGCTGTGCTT
GAAGTACAAC TTGAGGGCGA TTGGAAAACC TATTGGCGCA GTCCTGGGGA AGGCGGTATT
GCGCCGACGA TAAAATGGGA TGGCTCACAC AATCTACAGC AAGTAGATTG GAGATGGCCA
GCGCCAGAGG AATTCTCATT ATTGGGATTA CAAACCTTTG GTTACAAAGG TAATACCACC
TTTCCCTTAA CCCTAAAAGT CGATGATATC GCTGCACCAA CCCAGCTGCG CGGCAAAGTG
ACCTTGTCGA CCTGTACCAC TATCTGTGTA CTGACGGATT ATCAGATTAG TCTCGACTTC
ACGCCCAATG CGCTGCAAGC AGATACCGAT GCCATGTTGG CCTACAACAA GGCCGTGTCG
CTTGTGCCAC AAAAAGTGTT GTCCCAAGAG AGCCAGAATC CTGCCATGAC AATGGGTTGG
GATGTCGCCA AAGGTCAACT TGAAGTCAGA CTCAATGATG CCAACTGGCA GCAACCCACA
GTGATTATCG ATGGCGAGCC AGATACCACA TTCAAGCTAG TGAGCTTAAA ACCAATCGAA
AGTGATGCTA ACGGCAAGCA ATTAGTTGGT ATTTTTAGCG GTAAAAGTTG GCTGGGCGAG
CCTGAAGTTT TGGGTAAATC GCTGAACATA ACTGTCGCCG ATAGCGAGCG GGCGTTGGAA
TACAGCGCCG AAGTGAAGCC TGTGGTGATT ACTCAAGCAA GTACCTCGAT ATTTGGCATG
ATTTTGTTAG CGCTTATTGG TGGTTTGATC TTAAACGTCA TGCCCTGTGT GTTACCAGTA
CTCGGTATGA AGCTCAGTTC AGTGGTTGCA GCGCCTGATC TTAAGCGTAA TCAAATCCGC
CAACAGTTCA TCGCATCAGC GCTGGGGATA TTGGCCTCAT TCTGGTTACT GGCTGGCTTT
ATCTTAATGC TTAAACTCAC GGGTCAAGCG ATTGGTTGGG GTGTGCAGTT CCAAAACCCT
TGGTTTATCG GCTTTATGGC GCTGGTGACC ACAGTGTTTG CCTTCAATAT GTTAGGTGTG
TTTGAGATCA ACTTACCCTC TAACGTGCAA ACCAAGTTGG CGACAACGGG CGGCAATAAT
AACAGCGGCC ATTTTTTACA GGGCATGTTT GCGACGCTAC TGGCGACACC GTGTAGTGCA
CCATTTTTGG GTACTGCAGT CGCCTTCGCC TTGGGCGCCG ATGTACTGAG TTTGTTTGCC
ATCTTTACCG CGTTGGCCGT GGGTATGGCG TTCCCTTGGT TAATCGTGGC GGCATTCCCG
CAAGTGGCGG GTTATTTCCC TAAACCTGGC CGTTGGATGA ATACAGTTAA AGTGTTTTTC
TCCGGCATGT TGCTCATCAC CAGTTTGTGG CTGATTAGCC TGTTGGCCAG CTTTATTGAT
GTGATCTACC TATGGCCGTT AGCGGGTGTC ATTACACTGA TATTTATGGT GTTTATGGCT
AAAAAATATG GCGCGATTGC TATTGTGAGC TGCTTAGGTG TCGGCATTTT ACTGTCGGCG
GTTATTGCAT TTATGACGGC GAACCAGTGG GCTAAACCTT TACCTGCGGA TCTTGCTTGG
ACGCCATTGG ATCAAGCATT GATTAATCAG CAGGTGGCTC AGGGCAAGAC AGTATTTGTC
GATGTGACGG CTGATTGGTG CATTACCTGT AAGGCCAATA AAGTTGGCGT GATCTTGCAA
GATCCTGTCT ATAGCCTGTT GCAACAGCCG CATATTTTGC CGATGAAGGG CGATTGGACT
ACGCCTTCTG AGCCCATTAC TCACTACCTG CAAAGCCATA ATCGTTTCGG GGTGCCATTC
AACGTGGTTT ACGGCCCAGG TGCACCGCAA GGGATTGAGT TACCGGAAAT TCTATCGACT
GACCTTGTGC TTGCTGCGAT TGAGCAGGCC TCAGCGTCCC CTGAAAAGTC ATCCGTAGCG
GCAGGGAAAT AA
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| Protein sequence | MSTLKSMLTR FWILALIVTS PSLLAASTGW LVNDNHPPAK VRFMLTGEVD SATNTLPAVL
EVQLEGDWKT YWRSPGEGGI APTIKWDGSH NLQQVDWRWP APEEFSLLGL QTFGYKGNTT
FPLTLKVDDI AAPTQLRGKV TLSTCTTICV LTDYQISLDF TPNALQADTD AMLAYNKAVS
LVPQKVLSQE SQNPAMTMGW DVAKGQLEVR LNDANWQQPT VIIDGEPDTT FKLVSLKPIE
SDANGKQLVG IFSGKSWLGE PEVLGKSLNI TVADSERALE YSAEVKPVVI TQASTSIFGM
ILLALIGGLI LNVMPCVLPV LGMKLSSVVA APDLKRNQIR QQFIASALGI LASFWLLAGF
ILMLKLTGQA IGWGVQFQNP WFIGFMALVT TVFAFNMLGV FEINLPSNVQ TKLATTGGNN
NSGHFLQGMF ATLLATPCSA PFLGTAVAFA LGADVLSLFA IFTALAVGMA FPWLIVAAFP
QVAGYFPKPG RWMNTVKVFF SGMLLITSLW LISLLASFID VIYLWPLAGV ITLIFMVFMA
KKYGAIAIVS CLGVGILLSA VIAFMTANQW AKPLPADLAW TPLDQALINQ QVAQGKTVFV
DVTADWCITC KANKVGVILQ DPVYSLLQQP HILPMKGDWT TPSEPITHYL QSHNRFGVPF
NVVYGPGAPQ GIELPEILST DLVLAAIEQA SASPEKSSVA AGK
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