| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4222 |
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| Symbol | |
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| ID | 5373040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 5035609 |
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| End bp | 5036541 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640832487 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_001368401 |
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| Protein GI | 153002720 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAATAC AAGACAGATT TATGTCACCG CAATGGAAAG CACGCTTCAA AGGGTATGTG
CAGGTTACTA AGCCTGGCAT CATTTTCGGG AATCTGATTT CCGTTGCTGG CGGTTTTTTA
TTAGCCGCCA AAGGCGACGT AAATCTGGTC TTGATGCTGG CGAGCTTAGT GGGATTGTCC
TTGGTCGTAG CCTCGGGTTG CGCAATCAAT AACTGTATTG ACCGTGATAT CGACGCCAAG
ATGCAGCGAA CCTGCAAACG CGTGACCGTC ACGGGCGAAA TTGCCGTGGG TAACGTCCTC
GCGTTTGGAC TCGCCTTAGG CGTGTTGGGC TTTAGTATCT TAGCCTTGTT TACCAATGCA
TTAGCCCTGC TATTTGCCGT TATTGGTTAC ATCGTTTATG TGGGGGTTTA TAGCCTCTAC
ATGAAACGTA ACTCAGTGTA CGGCACTTTA GTTGGCAGCT TCTCGGGCGC AGTACCACCC
GTGGTTGGCT ATTGCAGCGT GACAGGGCAA ATGGACATGG GCGCGGCTAT TTTGCTGTTG
ATGTTCAGTT TATGGCAGAT GCCACATTCT TACGCCATCG CGATTTTCCG TTTTAATGAC
TATGCGGCAG CCAATATTCC TGTTCTACCG GTTGCAGAAG GCATGACCAA AGCAAAACTG
CATATCGTGC TTTATATTGC CGTGTTCGCC TTAGTCAGTG CACTGTTGCC ACTCGCGGGT
TACACAGGTA TCGCCTTTAT GGCGGTCACC TGTGCCACCA GCCTGTGGTG GCTTGCCATG
GCATTAAAAG GTTATCGCCA CGGCGTCGAC ATGCAACGCT GGGCTCGCCA AGTGTTTGGT
TTTTCAATCA TCACTATTAC GGCGCTCAGT GTGACTATGG CACTCGACTT CCAAGTCGTG
AGTCAGGCGC CACTGCTCAC CTTAGTGAAG TAA
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| Protein sequence | MQIQDRFMSP QWKARFKGYV QVTKPGIIFG NLISVAGGFL LAAKGDVNLV LMLASLVGLS
LVVASGCAIN NCIDRDIDAK MQRTCKRVTV TGEIAVGNVL AFGLALGVLG FSILALFTNA
LALLFAVIGY IVYVGVYSLY MKRNSVYGTL VGSFSGAVPP VVGYCSVTGQ MDMGAAILLL
MFSLWQMPHS YAIAIFRFND YAAANIPVLP VAEGMTKAKL HIVLYIAVFA LVSALLPLAG
YTGIAFMAVT CATSLWWLAM ALKGYRHGVD MQRWARQVFG FSIITITALS VTMALDFQVV
SQAPLLTLVK
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