Gene Shew185_4220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4220 
Symbol 
ID5373419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp5034634 
End bp5035254 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content49% 
IMG OID640832485 
Productcytochrome o ubiquinol oxidase subunit III 
Protein accessionYP_001368399 
Protein GI153002718 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID[TIGR02842] cytochrome o ubiquinol oxidase, subunit III 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATTG CAATCCCAGC AGATTTAGAA GTAGCTCACA CAGAAGATCA CCACGAACAC 
CATGACACGA GTGGCAACAC TCTGTTTGGT TTTTGGATTT ACCTGATGAC CGACTGCATT
TTGTTTGCCT CGGTTTTCGC AACCTATGCG GTGCTCTACA TGAACACGGA CGGTGGCGTT
TCGGGTAAAG ACATTTTCGA ATTGGACTTT GTGCTGATTG AAACTGCCGC CCTGCTCGTT
AGTAGTATTA CCTATGGCAT GGCGCTGATT TTTGCTAAGC GCCACAACAA AGCTGCGACC
TTGGCTTGGT TACTCGTCAC CTTCGCCCTC GGATGTGTGT TTATCGGGAT GGAAGTCTAT
GAATTCCATC ACCTGATTGA ACACGGCAAT GGCCCACAAC GCAGCGCTTT CCTGTCGTCC
TTCTTCACCC TGGTCGGTAT GCACGGCTTG CACGTGACCG CAGGTCTGAT TTGGATGGCG
ATCATGATGA TTGAAGTGGC GAAAACCGGT TTAGGTAATC GCAGCATCAC CCGCCTGAGC
TGCTTAAGCT TGTTCTGGCA TTTCCTCGAC ATAGTGTGGA TTTGTGTATT CACGGTCGTG
TATTTATTGG GAGCACTTTA A
 
Protein sequence
MSIAIPADLE VAHTEDHHEH HDTSGNTLFG FWIYLMTDCI LFASVFATYA VLYMNTDGGV 
SGKDIFELDF VLIETAALLV SSITYGMALI FAKRHNKAAT LAWLLVTFAL GCVFIGMEVY
EFHHLIEHGN GPQRSAFLSS FFTLVGMHGL HVTAGLIWMA IMMIEVAKTG LGNRSITRLS
CLSLFWHFLD IVWICVFTVV YLLGAL