Gene Shew185_4219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_4219 
Symbol 
ID5373418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp5032653 
End bp5034632 
Gene Length1980 bp 
Protein Length659 aa 
Translation table11 
GC content49% 
IMG OID640832484 
Productcytochrome o ubiquinol oxidase subunit I 
Protein accessionYP_001368398 
Protein GI153002717 
COG category[C] Energy production and conversion 
COG ID[COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 
TIGRFAM ID[TIGR02843] cytochrome o ubiquinol oxidase, subunit I 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTTC TCGGTAAATT AAGCTTAGAT GCGATTCCGT ATCACGAGCC TATCATCATG 
GTGACCTTAG CGGTCGTCGC AGTGGTAGGT TTGTATATCG CAGCCTTGAT CACTAAACAC
AAAAAATGGA GCGTACTTTG GAACGACTGG TTAACCTCAG TTGACCATAA ACGCCTCGGT
ATCATGTACA TAGTGTTAGC TTTGGTGATG CTCATTCGTG GCTTCTCCGA TGCCATTATG
ATGCGTACCC AGCAAGCACT CGCCACCAAC GGCGCCGCAG GTTATCTGCC GCCTGAACAT
TACGACCAAA TCTTCACCGC CCACGGCGTG ATCATGATTA TCTTTATGGC GATGCCATTT
ATGATAGGCC TGATGAACTT AGTGTTGCCG CTGCAAATTG GTGCCCGCGA CGTTGCCTTC
CCATTCTTGA ACAACCTCAG CTTCTGGCTT ACCGCCTCTG GCGCTGTGTT GATCAATATT
TCATTGGGTT TAGGTGAATT TGCTAAGACA GGTTGGGTGG CGTATCCACC ACTCTCAGAG
CTGGCTTACA GTCCGGGGGT TGGGGTCGAT TACTATATCT GGGCACTGCA GATTTCGGGC
ATAGGGACGA CCTTAACCGG GGTGAACTTT ATCGCCACCG TACTGAAGAT GCGTGCCCCA
GGCATGAAGC TGATGCAAAT GCCAATCTTC ACTTGGACTT GTACTTGGGC GAACATTTTG
ATCGTCGCGT CATTTCCTAT CTTAACCGCT GTGTTAGCCC TGCTGACACT CGACCGTTAC
ATGGACTTCC ACTTCTTCAC CAATGACGGT GGCGGTAACG CCATGATGTA TATCAACCTG
TTTTGGGCGT GGGGACATCC TGAAGTTTAC ATCCTGATTT TGCCTGCTTT TGGTATTTTC
TCCGATGTGA TCTCAACCTT TACCTCTAAA CGTCTGTTCG GTTACACCTC TATGGTGTGG
GCGAGTGGTG CGATTTCAAT TCTAGGTTTC ATCGTTTGGT TACACCACTT CTTCACCATG
GGCTCAAGTG CCAACGTCAA CGCCTTCTTC GGGGTTATGA CTATGGTGAT TGCGGTTCCA
ACTGGGGTGA AACTGTTTAA CTGGTTGTTC ACTATCTACC GTGGCCGCCT ACGTTTAACG
GTACCTGTGT TGTGGACGTT AGGCTTTATG GTGACTTTCA CCATAGGCGG CATGACAGGT
GTGCTATTAG CCTTACCTGG TGCCGACTAC GTTCTACATA ACAGTTTGTT TTTAATCGCA
CATTTCCATA ACACTATTAT TGGTGGTGCG GTATTTGGTT ATTTAGCAGG CTTTGCTTAC
TGGTTCCCTA AAGCGACAGG TTTCCACTTA AATGAGCGTT TAGGTAAAGC GTCATTCTGG
TGCTGGCAAA TCGGTTTCTA TGTGGCCTTT ATGCCGCTGT ACGTACTGGG CTTTATGGGT
ATGACACGCC GTATCAACCA CATTGATAAC CCAGCGTGGA ACGTGTGGAT CTACTTAGCC
GCCGTGGGTG CTTGCATCAT CATGGTCGGT ATCATTCTGC AGTTTATCCA ACTGTACGTG
AGTATCCGTG ACCGCGACCA AAACCGCGAC ACCACGGGCG ATCCATGGAA TGGCCATACT
TTAGAGTGGT CAACCGCTTC TCCACCACAG TTCTATAACT TCGCTAAGCT GCCACAGGTT
GCTGATATCG ATGCCTTTAC CGATGCGAAA GAAAAAGGCG TGGCTTATCA ACGTCAAAAA
CACTACCAAG CTATCCATAT GCCGAAAAAT ACCCCAAGCG GTATCTTAAT GGCGCTGGGG
ATCACTGCCG CTGGTTTTGC CGCTATTTGG CACATCCTGT GGTTAGCCAT TGTGGGCTTA
GTGGGCGCTT TCGTGGTGTT CCTGTTCCGT GCTTATAACA ATGACGTCGA CTATTACGTG
CAACCCGATG AAGTGGCTCG CATTGAAAAT GCCCACTTAA ACAATGTAGT AAGGGGCTGA
 
Protein sequence
MSFLGKLSLD AIPYHEPIIM VTLAVVAVVG LYIAALITKH KKWSVLWNDW LTSVDHKRLG 
IMYIVLALVM LIRGFSDAIM MRTQQALATN GAAGYLPPEH YDQIFTAHGV IMIIFMAMPF
MIGLMNLVLP LQIGARDVAF PFLNNLSFWL TASGAVLINI SLGLGEFAKT GWVAYPPLSE
LAYSPGVGVD YYIWALQISG IGTTLTGVNF IATVLKMRAP GMKLMQMPIF TWTCTWANIL
IVASFPILTA VLALLTLDRY MDFHFFTNDG GGNAMMYINL FWAWGHPEVY ILILPAFGIF
SDVISTFTSK RLFGYTSMVW ASGAISILGF IVWLHHFFTM GSSANVNAFF GVMTMVIAVP
TGVKLFNWLF TIYRGRLRLT VPVLWTLGFM VTFTIGGMTG VLLALPGADY VLHNSLFLIA
HFHNTIIGGA VFGYLAGFAY WFPKATGFHL NERLGKASFW CWQIGFYVAF MPLYVLGFMG
MTRRINHIDN PAWNVWIYLA AVGACIIMVG IILQFIQLYV SIRDRDQNRD TTGDPWNGHT
LEWSTASPPQ FYNFAKLPQV ADIDAFTDAK EKGVAYQRQK HYQAIHMPKN TPSGILMALG
ITAAGFAAIW HILWLAIVGL VGAFVVFLFR AYNNDVDYYV QPDEVARIEN AHLNNVVRG