| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4213 |
|---|
| Symbol | |
|---|
| ID | 5372722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 5023061 |
|---|
| End bp | 5024425 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640832478 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001368392 |
|---|
| Protein GI | 153002711 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0526543 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAC GTGCCATTGT GTGGCAAGTA TTTAACTCCC TTAAAGCGCG CTTAGTGATT
AGCGCGCTAT TGTTTATCTT AGTGTTATTA CCTTTAATCG GCGTCGCCTT AAACGATGCC
TTTACCGAGC AAGTTAAAAG CGCGACCAAA AATGAACTCA GCGCCTATGT CTATTCGATA
CTCGCGGTGA CTGAAGTCGA GAATAAGCAA ATCTCTATCC CAGAATTAGT ACTCGAAAAT
CGTTTTAACC TCATTCAATC TGGGCTGTAT GCCATTGCGA CCACTGAAGA TGCCAGCGGC
AAACAAACGA TCGTGTGGCA CTCGCAATCT TTTATGGGCA TGGTGCCACC GCCACATTTT
ACCATCCCAG CAACGGGTCA AAGTGCCTTT GAGCAAATCG AGCTCGCCGA ACAACCCAAT
TTGATTTATA GCTTTAGCGT CAGTTTTGCC AGCCAAAATC AAAACGTGCC TGTGACGATT
CACATCATTA AGGACGAGCG GGAATTTCAG CAGCAAATCG ATCAATTCAA CCAGCAGCTT
TGGACTTGGC TGCTGATCCT CATGTTCGTC ATGCTCGTGT TCCAACTGAG CTGGCTAGTG
TGGACGCTGC GGCCATTGGC ACGCTTTACC CAAGAATTAC ATTCCGTCGA GCAAGGTAAG
TCGATGCAGC TAAGTAGTCA GTACCCCACT GAATTACAAG CAGTTGCGCG GCAGCTCAAT
ATTTTGCTCA ATACCGAACA AACCCAGCGC AAACGCTATC GTAATGCCTT GGCCGATCTT
GCCCACAGCC TCAAAACACC GCTGGCGGTG ATCAAGAGTC AGGCCGACTT AAGCGAAGCC
TCCAGCGAGC AAGTGTCGGT GATCAGCCGC ATTATTGGCC ACCAGCTGAA ACGCGCCCAA
ACGGCAGCGG CAGCCTCGTG GCATTTAGGG ATTCGCGTCG ATGACGTCGC CGCTAAGTTA
TTACGCACCT TAGCTAAAAT TTATCGTGAG CCGCAAATCA ATCTCAGCGG CGAGATGGCT
AACGAAGCAG TATTCAAAGG TGATGAAGCG GATCTCACGG AAATTCTCGG TAACGTGCTC
GACAACGCCT GCAAAGCGGC AAAGTCCACA GTTAAATTAA CTGTGACCGG CGATGCCTAT
CAATTGCTGA TCTGCATCGA AGATGATGGA CCTGGGATCA GTGAAGCGCT GCAAAATCAA
ATCTTTGAAC GCGGTATTCG CGCTGATTCC TATCATCAAG GTAATGGTAT TGGGCTTGCG
ATCGTGCGCG ATTTAGTCGA CAGCTATAAC GGCAGAATTT CAGTCTCACG TTCAGAAACC
TTGGGCGGCG CCAAGTTCAG CATCAGCTTC GCGCATTCTA TTTAA
|
|---|
| Protein sequence | MSKRAIVWQV FNSLKARLVI SALLFILVLL PLIGVALNDA FTEQVKSATK NELSAYVYSI
LAVTEVENKQ ISIPELVLEN RFNLIQSGLY AIATTEDASG KQTIVWHSQS FMGMVPPPHF
TIPATGQSAF EQIELAEQPN LIYSFSVSFA SQNQNVPVTI HIIKDEREFQ QQIDQFNQQL
WTWLLILMFV MLVFQLSWLV WTLRPLARFT QELHSVEQGK SMQLSSQYPT ELQAVARQLN
ILLNTEQTQR KRYRNALADL AHSLKTPLAV IKSQADLSEA SSEQVSVISR IIGHQLKRAQ
TAAAASWHLG IRVDDVAAKL LRTLAKIYRE PQINLSGEMA NEAVFKGDEA DLTEILGNVL
DNACKAAKST VKLTVTGDAY QLLICIEDDG PGISEALQNQ IFERGIRADS YHQGNGIGLA
IVRDLVDSYN GRISVSRSET LGGAKFSISF AHSI
|
|---|
| |