| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4212 |
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| Symbol | |
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| ID | 5373465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 5022373 |
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| End bp | 5023068 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640832477 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001368391 |
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| Protein GI | 153002710 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000202187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTGT TATTGGTTGA AGATGATTTA GAACTGCAGG CTAACTTAAA ACAACATCTG
CTCGATGCCC ATTACAGTAT CGATGTGGCG AGCGATGGTG AAGAAGGCTT ATTTCAAGCA
CTCGAATACA ACTATGATGC GGCGATAATC GATGTCGGTT TGCCTAAGCT CAATGGTATC
GCGCTTATCC GCAGCGTGCG CGAACAGGAA CGCGACTTCC CAATCCTGAT TTTAACCGCG
AGGGACAGTT GGCAAGACAA GGTAGAAGGA CTCGACGCCG GTGCCGACGA CTACCTGACG
AAACCTTTCC ATCCCCAAGA ACTGGTCGCG CGGCTAAAAG CCCTGATCCG TCGCTCTGCC
GGCAAGGCCA GCCCTTTGAT TTATAACGGT CCCTTTAGCC TAAATACCAG CAGCTTAGAA
GTGCGTAAAG GCGAAGAACT GGTTAACCTC AGCGGCTCTG AATACAAGTT ATTCGAATTT
TTTATGCTGC ATCAGGGTGA AGTGAAATCC AAAACCGTAT TGACGGAGCA CATCTACGAT
CAGGATTTTG ATTTAGATTC TAACGTCATC GAAGTCTTTA TCCGCCGGTT ACGCAAAAAA
CTCGACCCTG ATAATCAATA CAACCTGATT GAAACCCTGC GCGGCCAAGG TTATCGCCTA
AAAGCGTTAA CGCCCGAGCC AACTGCCGAT GAGTAA
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| Protein sequence | MRLLLVEDDL ELQANLKQHL LDAHYSIDVA SDGEEGLFQA LEYNYDAAII DVGLPKLNGI
ALIRSVREQE RDFPILILTA RDSWQDKVEG LDAGADDYLT KPFHPQELVA RLKALIRRSA
GKASPLIYNG PFSLNTSSLE VRKGEELVNL SGSEYKLFEF FMLHQGEVKS KTVLTEHIYD
QDFDLDSNVI EVFIRRLRKK LDPDNQYNLI ETLRGQGYRL KALTPEPTAD E
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