| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4205 |
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| Symbol | |
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| ID | 5373502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 5010689 |
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| End bp | 5015566 |
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| Gene Length | 4878 bp |
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| Protein Length | 1625 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640832470 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001368384 |
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| Protein GI | 153002703 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACTTGT CCATGAGTTA TAAAAATGCT TCGAAATGGG GCTTATTAGT CCTGTTGATT
GGATTGGTGC TAAGCGCGTT ATTAACAGGG TTGACGGGGC GCATGAACGC CCAAAAGATT
GAGCAAGCCT TGCGCGAGGA CGCGGAGCAA ATCAGTGAGA ACGTGATTAA CCGTATCACC
TTATATCAAT ATGGTTTACG CGGTGCACGC GGCACGATAG TCACTGCGGG TGAGCATGAT
ATTAGTCGTG CTAGCTTCCA TCGTTATAGT TTAACGCGGG ATGTGGACCA TGAGTTTCCC
GGCGCCCGTG GATTTGGCTT TATTCGTCGA GTACCCAGTG CCGATGAAGC GGCATTTATA
GCAAGAGCTC GTCAAGATGA TTGGCCTGAC TTTAATATTC GCCAACTTAA CGCTCATGAT
GGCGAAAGAT ACGTTATTGA ATATATTGAG CCTGTAGACC GCAATAAAGC TGCCGTTGGC
TTAGATATTG CGTCAGAGGC ACATCGTAAA GCCGCTGCCG ATGCGGCTAT GTTATCCGGT
GAAGTGCGCT TATCTGCACC CATCACATTA GTGCAGGCTA CGGGTAGGCC GCTACAATCA
TTCTTAATTC TGCAGCCTAT TTATCGCACG GGTTTAGTAC CTAAATCACA ACAGGATAGA
CTTTCAGCTG GGTATGGTTG GAGTTATGCC CCCTTAGTGA CGAACGAAGT TCTAATGGGA
TTAGCGTTGA ATCAGAAGAT GACCAAGCTG TTGCTTAGCG ATATCACCCA AGCTGAGCGT
CCCATCAGTT TTTTTGAAAC ACACCCTGAT GAGGCGTCTC CATTATCTGC ATATCGCCAT
AAAATGACGA AAGACATTTT TGGTCGTCAA TGGCAGATAG AAGTCATCGC TTATCCATCA
TTTATTAAGT CATTGCATCT TAATCAACCC AGTTTAGTGC TGTTGAGTGG CAGTTTGTTT
AGCCTGCTTT TAGCCGCATT AATTGCCATG TGGTCCATCA GTTTGCAGCG TAAGCAGCAG
GTGCTGCTTG AACAGGCAAG GCGCGCTAGC ATGTTGGAGC ATTCTCTCGA TGGCATTATC
AGTTATGACA CTAAAGGCCA AATTACCAGT TGGAACCAAG GTGCGGAGCA GCTATTTGGC
TATACCGAGG CGCACGCTCT TGGCCAGTCG TGTTGTAAAT TGATTGTTCC TGCCAGCATA
GTGCAGGAAG AAAGAGCATT ATTCGCCGAA GTGTTAGCGG GTAAAACCTC TTTAAATCGG
ATAACTAGCC ATCAACGGCA AGATGGTAGT CATTTATCGA CCTCAACTAC GGCCGTGCCT
ATTTATGACG AGCATGGCAA GATTGCTGGC ATGAGCCAAA CGATCCGCGA TATTACAGCG
CAGCTTGAAG CTGAACGACA TATTTTAAGC TTGAATGCGA GTCTCGAACG GCAAGTCACC
AAGCGTACCC ATGCGTTGCA GCAGGCGTTA CTCGAAAACC AAACCTTGCT CGACACTATT
AATCAACAGC TACTCTATTC CGTTACTGAC CCCAATGGCG TCATCTTAGA GGTGAATGAT
AACTTTTGCC GTATTAGTGG CTATCCGCGT GAGCAACTGG TGGGGAAAAC CCATGCAATA
CTCAAGTCAG GTGAACATGA TGTGTCTTTC TGGCAATCGA TGTGGCAACA GATAAACTCG
GGACAGTCTT GGCACGGTGA AATCTGCAAC CTCGATAAGC ATCAAACGTT GAAATGGTTC
GATACTGTGA TTGGTCCAGT ATTTGATGAA TACGGTAAAA TTGAACGTTT TGTGGCATTA
AGGATTGATA TTACCGACCG TAAGTTGACA CAGATTGAGA AAAATAACTT AGGGTCATTA
CTGACTAACG TGCTCGATGC CGCCTCTGAA ATGTCCATCA TAGCCACTGA TGTACAAGGG
AATATCACCA TTTTTAACCG TGGAGCAGAG CGCTTACTCG GTTATTCAGC CGAGGAAATG
ATAGGTCAAT CTACCCCTGC GCCTCTGCAT TTGCCAGAGG AGGTAATGGT CAGGTCTGCG
GAGCTCTCCG CTGAATATGG TCACGACATT CAAGGCTTTG ATGTTTTCAT CTATAAGGCA
AGAGCCGAAG GTTCGGAAAC CCGCAATTGG ACCTATGTGC GTAAAGACGG TAGCCAGTTT
CAAGTGTCAC TTTCTGTCAC TGCGATGCGG GACAGTGTTG GCGAGATTAT TGGTTATTTA
GGCATTGGCG TCGATATTTC ACTGATGTTA CTGCAGCAAC AAGCACTGAT GACGGCCAGT
AACCATTTAA GTAAGGCCGC CGAAGTGGCT CAGTTAGGTA TCTGGACTTG GAATCTGCTC
GGTAATTCGC TTGAATGGAA TGAACGTATG TTTGCGATTT ACGATCAGCC TGAAAGTCTT
CGGGAACAAG GATTAACCTA TGAGCACTGG TCTATGCGGG TTCATCCTGA CGATATTGTT
GTTGCCGATG CTAAATTAAA GGCTGCCCTT CAAGGAATTG ATCTGTATGA CTCTATTTTT
AGGGTGGTAA GAACAGACGG TACGATTCGT TATGTTCAGG CTGCCGCCCA AATAGAGCGC
GATAAGCATG GTAATACTAT TAGAGTGATT GGGATTAATT TAGATATCAC AGAGCAGCGC
CAGTTAGAAG AGACTTTGAG GGCGGCGAAA CATGAAGCTG ATGCAGCGAG TGCGGCTAAG
TCTGCATTTT TAGCCAATAT GAGCCATGAA ATTCGCACTC CGATGAATGC TGTATTAGGT
ATGCTGCAAC TTATTCAGCA CACAGCACTT TCTGTGCAGC AGCAAGATTA TGTTAATAAA
ACACAAATTG CAGCAAAGTC ATTATTAGGG TTATTAAATG ATATCCTTGA TTTCTCCAAG
ATAGATGCGG GGAAGCTCAC CCTAGATCCT CATCCTTGTT CGATTGAATT GTTGATGCGA
GATCTTGCCG TTGTATTGTC AGGTAACCAT GGCGATAAGG ATGTCGAAGT GATGTTTGAC
CTAGACACGG CTTTGCCGTC TTGGCTGTTA GCAGATCAAC TTAGATTGCA ACAAATCCTC
GTTAACCTCG CGGGAAATGC CCTTAAATTC ACTCACCAAG GTCAAGTGAT TGTCGGCATT
GAATGTTTAC GACATGAGGC TAATACAGTC ACAGTACAAA TTTCAATCAC CGATACGGGT
ATTGGTATCA GTGACGAGCA GATTGAGCGG ATTTTTACTG GGTTTGAGCA AGCGGAGTCT
TCAACATCCC GCCGTTTTGG TGGCTCAGGG TTAGGGCTAG CGATCAGTAA AAGGCTCGTT
GAGCTCATGG GAGGGCAGTT ACAGGTAACG AGTCAAATAG GTGTGGGTAG TCGTTTCTGG
TTTGATGTGA CGTTTCCAAT TATGACGGAG AAAGAGAGTG AGCGGATTGA TCTCTCTAAA
TATCGTATTT TGGTTGTTGA TGATAATCAG CTAACAACAG AGATTTTACA TAAAGTATTA
ACAGGGTTCG GTTGTGAAGT TGAAACTGCA TCTGGCGGTT ACGAAGCCCT TGATAAGGTA
AAGCAAGCAA AGCCTTTTGA TGTCGTGTTA ATGGACTGGA GAATGTCTGA CCTTGATGGG
CTGCAGACTG CAGAGATGAT ACAAAACACA ACTTCTGTTA GCCCCCCCCC ATTAGTGGTA
ATGCTAACAG CCTATGGCCA TGAAGTGATT GCTGACAGTC AGTATATTAA AACTGTCCCT
TTCGTTAATT TCCTCACTAA ACCTGTGACC TCGCAGATCT TGGCTGAAGC TGTAATGAAC
GCTATCGAAG GCAAGACAAT GGATGTGCAC CCCAAGCCAC TTTCACAGCG GTTACTCTCA
GGGTTAAGTA TTCTAGTCGT CGAAGATAAT CAACTTAATC GACAAGTTAT CGATGAGCTA
TTGAGTTACG AAGGTGCAAG CGTGGTACTC GCCGACGGCG GATTGGAAGG TGTATATCAA
GTACTAGAAA GTAGCGATTT ATTCGATATC GTTATTATGG ACGTGCAAAT GCCGGACATA
GATGGCCTCG AAGCAACTCG CCGTATTCGT GCTGACGGAC GTTTTTCTGA ACTCCCCATA
CTTGCAATGA CTGCTAATGC TTCACCGTCC GATAGGCAAG AGTGTCTCAA TGCGGGTATG
AATGACCATG TTGGCAAACC CATCGATATG CCATTATTGC TGCCGAGTAT TTTGCGCTTA
GTTGGCCGTG AGGATATGAC CTCTGCAGAA TCTGAAGTCT ACAGTCCCGA AGCGACGCAG
GAGCAGAGTG ATGAGCAGTT ACTCGATGAT ATTCGCCTGA TCCTGCGTCG TTTTGGGGGG
AATCAGTCTT TCTTCCAAAA AATGGTCAAA AGTTTTGCGC CTGAAATGAC GAAGCAACTA
AATCAGTTTA AACAATCAAC CAAAATTTTT GATTATTCAA CTGCTGCGGC GATTAGCCAT
GGCATTAAAG GCATTGCCAG TAATTTTGGT GCTCGGCGTT TAGCTGCGCA TGCGGCTTAC
TTAGAGAAAC AGTTTAAGCA AGAATGTCCT GAACTGATTG ATATTAAGCG CTGGACGGAT
ACGTTAGAGG AACTCATTAA TCAGAGTAGT CAGCAGCTTT CAACCTACTT TGAGGTGAAA
AAATCTAATG CAGTTATTAG CAATAATGTA GAAAAAGCCG TGTATTCTTC GGCATCGGTG
CAAAGTGTTA AGATGGACCT GAATACCCTA ATGACCCTAT TAAAAGAGAA CAATTTAGAA
GCTATGGCCT TAACTGACCA GTTAGCCGAA CTGTTATCAG GCCATCCACA ATGGCCCATA
TTGCATGGGC AAGTGCAAGC ACTCGATTTT AATCAGGCAT TAGATACGCT ACGGATTATC
ATGTTGGAGG AGGCGTAA
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| Protein sequence | MHLSMSYKNA SKWGLLVLLI GLVLSALLTG LTGRMNAQKI EQALREDAEQ ISENVINRIT
LYQYGLRGAR GTIVTAGEHD ISRASFHRYS LTRDVDHEFP GARGFGFIRR VPSADEAAFI
ARARQDDWPD FNIRQLNAHD GERYVIEYIE PVDRNKAAVG LDIASEAHRK AAADAAMLSG
EVRLSAPITL VQATGRPLQS FLILQPIYRT GLVPKSQQDR LSAGYGWSYA PLVTNEVLMG
LALNQKMTKL LLSDITQAER PISFFETHPD EASPLSAYRH KMTKDIFGRQ WQIEVIAYPS
FIKSLHLNQP SLVLLSGSLF SLLLAALIAM WSISLQRKQQ VLLEQARRAS MLEHSLDGII
SYDTKGQITS WNQGAEQLFG YTEAHALGQS CCKLIVPASI VQEERALFAE VLAGKTSLNR
ITSHQRQDGS HLSTSTTAVP IYDEHGKIAG MSQTIRDITA QLEAERHILS LNASLERQVT
KRTHALQQAL LENQTLLDTI NQQLLYSVTD PNGVILEVND NFCRISGYPR EQLVGKTHAI
LKSGEHDVSF WQSMWQQINS GQSWHGEICN LDKHQTLKWF DTVIGPVFDE YGKIERFVAL
RIDITDRKLT QIEKNNLGSL LTNVLDAASE MSIIATDVQG NITIFNRGAE RLLGYSAEEM
IGQSTPAPLH LPEEVMVRSA ELSAEYGHDI QGFDVFIYKA RAEGSETRNW TYVRKDGSQF
QVSLSVTAMR DSVGEIIGYL GIGVDISLML LQQQALMTAS NHLSKAAEVA QLGIWTWNLL
GNSLEWNERM FAIYDQPESL REQGLTYEHW SMRVHPDDIV VADAKLKAAL QGIDLYDSIF
RVVRTDGTIR YVQAAAQIER DKHGNTIRVI GINLDITEQR QLEETLRAAK HEADAASAAK
SAFLANMSHE IRTPMNAVLG MLQLIQHTAL SVQQQDYVNK TQIAAKSLLG LLNDILDFSK
IDAGKLTLDP HPCSIELLMR DLAVVLSGNH GDKDVEVMFD LDTALPSWLL ADQLRLQQIL
VNLAGNALKF THQGQVIVGI ECLRHEANTV TVQISITDTG IGISDEQIER IFTGFEQAES
STSRRFGGSG LGLAISKRLV ELMGGQLQVT SQIGVGSRFW FDVTFPIMTE KESERIDLSK
YRILVVDDNQ LTTEILHKVL TGFGCEVETA SGGYEALDKV KQAKPFDVVL MDWRMSDLDG
LQTAEMIQNT TSVSPPPLVV MLTAYGHEVI ADSQYIKTVP FVNFLTKPVT SQILAEAVMN
AIEGKTMDVH PKPLSQRLLS GLSILVVEDN QLNRQVIDEL LSYEGASVVL ADGGLEGVYQ
VLESSDLFDI VIMDVQMPDI DGLEATRRIR ADGRFSELPI LAMTANASPS DRQECLNAGM
NDHVGKPIDM PLLLPSILRL VGREDMTSAE SEVYSPEATQ EQSDEQLLDD IRLILRRFGG
NQSFFQKMVK SFAPEMTKQL NQFKQSTKIF DYSTAAAISH GIKGIASNFG ARRLAAHAAY
LEKQFKQECP ELIDIKRWTD TLEELINQSS QQLSTYFEVK KSNAVISNNV EKAVYSSASV
QSVKMDLNTL MTLLKENNLE AMALTDQLAE LLSGHPQWPI LHGQVQALDF NQALDTLRII
MLEEA
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