Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_4189 |
Symbol | |
ID | 5369992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 4992493 |
End bp | 4993125 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640832454 |
Product | electron transport protein SCO1/SenC |
Protein accession | YP_001368368 |
Protein GI | 153002687 |
COG category | [R] General function prediction only |
COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAAAA GAATTTTAGT CATCGCCATA TTATTGATCG GCCTTGGCGG CCTATTTGCG GTGAAATTTA ATCCCCCGAA ACCTATCGAG CTAGAGAGTG GTTTTTTGTT TCCGCAGGCC TATGAATTAG CGCCCTTTGA ATTGGTTGAT CAACATAAGC AGGCTTTTAC CAACGCCAGT TTGCAGGGGA AATGGAGCTT ATTCTTTATC GGTTTTACCT TTTGTCCCGA CGTTTGTCCT ACGACCTTAA ATAAACTCGC GGCTGCTTAT CCCGATCTAA ACAAAATTGC GCCATTGCAG GTGGTGTTTT TATCCGTCGA CCCCAAACGG GACACACCGG ATAAACTCCT GACCTATGTG AATTTTTTCA ATCCAGAATT TAAAGCTGTC ACGGGCGAAC AGACACAAAT CTTCCCGCTC ACCCGCAGCT TAGGACTGAC CTATGCCATG GTCGGTGAAG GGGAAAACTA CCAAGTCGAC CATAGTGCGG GTTATGTGTT GGTGTCGCCG CAGGGAACGC GAGTCGCAGT GTTTAAGCCT ACGGCAGCGT TAGGCAAACC GCCGCAGGTG TTAAATGATG AAATGATTAG CGATTTTAGA AAAATAGTGG CGCAATACAA ACCTAGCCGT TGA
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Protein sequence | MQKRILVIAI LLIGLGGLFA VKFNPPKPIE LESGFLFPQA YELAPFELVD QHKQAFTNAS LQGKWSLFFI GFTFCPDVCP TTLNKLAAAY PDLNKIAPLQ VVFLSVDPKR DTPDKLLTYV NFFNPEFKAV TGEQTQIFPL TRSLGLTYAM VGEGENYQVD HSAGYVLVSP QGTRVAVFKP TAALGKPPQV LNDEMISDFR KIVAQYKPSR
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